Escherichia ruysiae: OSH18_05010
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Entry
OSH18_05010 CDS
T09019
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
eruy
Escherichia ruysiae
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eruy01002
]
OSH18_05010 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eruy01011
]
OSH18_05010 (ldtD)
Peptidases and inhibitors [BR:
eruy01002
]
Cysteine peptidases
Family C82
OSH18_05010 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
eruy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
OSH18_05010 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
WGM53508
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Position
complement(1003916..1005763)
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFSVQADEPEVIPGDSPVAVSEQGDALPQAQATAIM
AGLQPLPEGAAENARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGLARDVVLSDAMLGYLHFVANIPVKGTHWLYSSKP
YALSTPPLSVINQWQVALNNGQLPTFVAGLAPQHPQYAAMHESLLTLLSDTKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLEGGPKIALPGDETPADAVVSPSAVAVETAETKPMD
RQTTARSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSKEAIDPWQVDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSDAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaacatgatgtgtggtcgtcggctttcggcaataagtttgtgtctggccgta
acattcgctccactgttcagtgtgcaggctgatgagcctgaagtaatccctggcgacagc
ccggtggctgttagcgaacagggagatgcactgccgcaagcgcaagctacggcaattatg
gcgggacttcagccgctaccagagggtgcggcggaaaacgctcgcacacaaatcgaatct
caattacccgcaggttataagccggtttatcttaaccagcttcaactgctgtatgccgca
cgtgacatgcagcctatgtgggaaaaccgtgatgcggtaaaagccttccagcagcaactg
gcggaagtggcgattgccggttttcagccgcagtttaataaatgggtagagttactgact
gatcctggcgttaacggtctggcacgcgacgtagtgctgtcggatgcaatgctgggctat
ctccatttcgttgccaacattccggtcaaaggtacgcactggttgtacagcagtaaacct
tatgcgctctctacaccaccgctctcggtcattaaccaatggcaggtggcgctaaataat
ggtcagttgccaacgtttgttgcaggactggctccgcagcatccgcaatatgccgcgatg
catgaatctttattgaccttactcagcgatacgaaaccgtggccacaactgaccggtaaa
gcaacgctgcgtcctggccagtggagtaatgatgtaccagcactgcgcgagattttgcag
cgaacgggaatgctcgaaggcgggccgaaaattgcgctccctggcgatgaaacacccgca
gatgcagtcgtgagtccgtccgccgttgccgtcgaaacagcagaaactaagccgatggac
aggcaaactacggctcgcagtaaacctgcgccagccgtacgcgctgcctacgataatgag
ctggtggaagccgttaaacgttttcaggcatggcaaggattgggggccgatggcgctatt
ggtccggcaacgcgggactggttaaatgtaacgccagcccagcgtgcaggtgtgctggca
ctcaacatccagcgtttacgcttgctgcctgcggagctttctactggcatcatggtcaat
atacccgcctattctttggtctattaccagaacggtaatcaggtgctggactcgcgggtg
attgtcggccgtcctgaccgcaaaacaccgatgatgagcagtgctttaaacaatgtggtg
gtgaatccgccgtggaacgtaccgccgacgctggcacgcaaagatattctgccgaaagtg
cgtaacgatccgggttatctggaaagtcatggctatacggtgatgcgcggctggaacagc
aaagaagcgattgatccgtggcaggttgactggtcaacgattaccgcctcgaatttaccg
ttccgcttccagcaagctcctggcccacgaaattcgctaggacggtataaatttaatatg
ccgagttcagacgctatctacttgcatgacacgcctaatcacaatctgttcaagcgtgat
acacgcgcgttaagctcagggtgtgtgcgggtgaataaggcatctgatctggcaaatatg
ctgttgcaggatgcaggctggaatgacaagcgtatttccgacgccctgaagcagggagat
acccgttacgtcaatatccgtcagtcgatcccggttaatctctactacctgaccgctttt
gtcggtgcagatggtcgtactcaatatcgtacagatatttacaattatgatctgcctgcg
cgatccagctcgcaaattgtatcgaaagcggaacaattaatcagataa
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