Escherichia ruysiae: OSH18_05465
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Entry
OSH18_05465 CDS
T09019
Symbol
rcdA
Name
(GenBank) DNA-binding transcriptional regulator RcdA
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
eruy
Escherichia ruysiae
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eruy03000
]
OSH18_05465 (rcdA)
Transcription factors [BR:
eruy03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OSH18_05465 (rcdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
WGM53594
LinkDB
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Position
complement(1121347..1121922)
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AA seq
191 aa
AA seq
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MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF
SSFTEIMSKQYQAFFSDVSDASGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK
TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREDILQMVAQLAGQE
IKFRQQKTHQP
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcgctaacgatccgcaacggcgagaaaaaatcatccaggccacgctggaggcg
gtgaaactttacggaatacatgccgttacacaccgcaaaatcgctacccttgccggagtg
ccgttggggtcgatgacctactatttttcaggaattgatgagctgctgctggaggcgttc
agcagttttacagagataatgtctaagcaatatcaggcattttttagcgatgtcagtgat
gcatcaggcgcctgccaggccataactgacatgatctacagctcgcaggttgcaacgccg
gataacatggaactgatgtatcaactctacgcattggccagccgaaaaccgctattaaaa
acggtgatgcaaaactggatgcagcgcagtcagcaaacgctcgaacaatggtttgaaccc
ggaaccgcccgcgcgctggatgcgtttattgaagggatgacactgcattttgtcactgac
cgtaagccgctatcgcgcgaggatattttgcagatggtggcgcaattggcagggcaggag
ataaaattcaggcaacaaaaaacccaccaaccttga
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