Escherichia ruysiae: OSH18_05730
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Entry
OSH18_05730 CDS
T09019
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eruy
Escherichia ruysiae
Pathway
eruy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSH18_05730 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eruy03019
]
OSH18_05730 (rhlE)
Enzymes [BR:
eruy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OSH18_05730 (rhlE)
Messenger RNA biogenesis [BR:
eruy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OSH18_05730 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WGM53642
LinkDB
All DBs
Position
complement(1181553..1182917)
Genome browser
AA seq
454 aa
AA seq
DB search
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLISREPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDEIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSHMI
GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRAEGGAKSG
NAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgattctttgggtttaagccctgatatcctgcgcgccgttgccgagcaaggt
taccgtgaacccacccctattcagcagcaggcgatccctgcggtgctggaaggtcgcgac
ctgatggccagtgcccagaccggcacgggcaaaacagcgggctttacgctgccgctgttg
caacacctgatttcccgcgagccgcacgccaaagggcgtcgtccggtgcgcgcgctcatt
cttaccccgacccgtgaactggcggcgcagattggtgaaaacgtccgtgattacagcaaa
tacctgaacattcgttcgctggtggtgtttggtggcgtcagcattaacccgcagatgatg
aagctgcgtggcggtgttgatgtgctggtggcaacgccggggcgtttactggatctggaa
caccagaacgcggtgaaactggatcagatagagatcctcgtccttgatgaagctgaccgt
atgctcgatatgggctttatccacgatattcgtcgtgtgttaacaaaactgcccgcgaag
cgccagaacctgctgttctccgcgactttctctgacgagattaaagctctggcagaaaaa
ctgctgcataacccgctggaaatcgaagttgcacgccgcaataccgcctctgagcaggta
acccagcacgttcactttgtcgataagaaacgcaaacgggaattgctgtcacacatgatt
ggtaaaggcaactggcagcaggtgctggtgtttacccgtaccaaacatggcgctaaccat
ctggctgaacaattaaataaagatggcattcgcagtgcggcgatccacggtaataaatcg
caaggtgcgcgtacccgtgcgctggccgattttaaatcgggcgatattcgcgtgctggtg
gcaactgacatcgccgcgcgtggcctggatatcgaagagttgccacacgtcgtcaactat
gagctgccaaacgtaccggaagattatgtccaccgtatcgggcgtaccggtcgtgccgcc
gccaccggcgaagcgttatcgctggtgtgtgttgatgagcacaaactgctgcgtgatatc
gaaaaactgctgaaaaaagagatcccgcgcattgcgattccgggctatgagccggacccg
tcaatcaaagccgaaccgatccagaacggtcgccagcaacgtggcggcggcggccgtggg
caaggtggtggtcgcggtcaacagcaaccacgccgcgctgaaggtggagcgaagtctggt
aacgcgaaacccgcagaaaaaccatctcgtcgtctcggcgatgccaaaccggcaggcgaa
caacaacgtcgccgccgtccgcgtaaacctgccgctgcgcagtaa
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