Escherichia ruysiae: OSH18_06220
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Entry
OSH18_06220 CDS
T09019
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
eruy
Escherichia ruysiae
Pathway
eruy00330
Arginine and proline metabolism
eruy00480
Glutathione metabolism
eruy01100
Metabolic pathways
eruy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
OSH18_06220 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
OSH18_06220 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
OSH18_06220 (speF)
Enzymes [BR:
eruy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
OSH18_06220 (speF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
WGM53729
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All DBs
Position
1280570..1282768
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AA seq
732 aa
AA seq
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MSELKIAVSRSCQNYFSTHRVCVNIEESNYIDVAAIVLSVDDVERGKLDEIDATGYGIPV
FIATENEEHVPAKYLSRISGVFEHCEARKTFYGRQLETAASHYETQLRPPFFRALVDYVN
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRSDLCNADVAMGDLLIHEGAPCIAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEENYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGILVTQSVHKQQAGF
SQTSQIHKKDRHIKGQPRYVPHKRMNNAFMMHASTSPFYPLFAALDVNAKMHEGVSGRNM
WMDCVANGIDARKLILENCHHIRPFVPELVDGKPWQSYPTAEIANDLRFFQFVPGEHWHS
FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSIL
FLLTPAEDMAKLQQLVALLARFEKLLEDDAPLADVLPSIYKQHEARYAGYTLRQLCQEMH
DLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVLRYFIALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKSS
EPQSALLKGEKL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattaaaaattgccgttagtcgttcttgccagaattacttttccactcatcgt
gtatgcgtgaatattgaagaaagtaattatattgacgttgctgccattgttttatcggtc
gatgatgttgaacgtggaaaactcgatgaaatagacgctactggctatggcattcctgta
tttattgccacggaaaatgaagaacatgtgcctgcaaaatacctgtcacgtatttcgggt
gtcttcgaacattgcgaagcgcggaaaacgttttatggtcgccagttagaaaccgcagcc
agccattatgaaacgcagctgcgcccgcctttcttccgcgcactggttgattatgtcaat
cagggtaacagcgcctttgattgccccggtcatcagggcggcgagtttttccgtcgccat
ccggcgggtaaccagtttgtagagtattttggtgaaactcttttccgttccgacttgtgc
aacgctgacgtggcgatgggcgatctgttgattcatgaaggtgcgccgtgtatcgcacaa
caacatgcggcaaaagtgtttaatgccgataaaacctacttcgttttaaacggcacctcc
tcttcaaacaaagtggtattaaacgcactgctgacaccgggcgatctggtgctgtttgac
cgcaataaccataaatctaatcaccacggggcgttgctacaggctggtgcaacaccggtt
tatctggaaacagcacgcaacccgtatggctttatcggtggcattgatgcgcactgcttc
gaagaaaattacctgcgcgaactgattgcagaagtcgcaccgcagcgggcaaaagaggct
cgtccgttccgcctcgcggttattcagttaggcacctacgacggtacaatttataacgcc
cgtcaggtagtggataaaattggtcatctgtgtgactacattctgtttgactccgcatgg
gtcggctacgagcagtttatcccgatgatggctgactgttcgccgctgctgctggagctt
aatgaaaacgatccgggcattctggttacgcaatcagtccataaacagcaggcaggtttt
tcccagacttcacaaattcataaaaaagaccgccatatcaaagggcaaccgcgttatgta
ccgcataaacgcatgaacaatgcctttatgatgcatgcctctaccagcccgttctatccg
ttgttcgcggcactggacgtcaacgctaaaatgcatgaaggcgtaagcggtcgcaatatg
tggatggactgcgtggcgaatggcattgatgcacgcaaactgatccttgaaaactgtcat
catattcgtccgttcgttcctgaactggtggatggcaagccatggcagtcataccccacc
gctgaaattgccaatgacctgcgtttcttccagtttgtaccaggagaacactggcactct
tttgaaggctacgcagaaaaccaatattttgtcgatccgtgcaagctgctactgactacc
ccaggcattgatgcacgtaacggcgaatatgaagcgttcggtgtccccgcaacgattctt
gctaacttcctgcgcgaaaatggcgtagtgccggaaaaatgcgatcttaactccatcctc
ttcctgcttactccggcagaagatatggccaaactacaacagcttgtcgccctgctggca
cgtttcgaaaaactgctggaagatgatgcgcctctggcggacgtactgccttccatttac
aaacaacatgaagcccgttacgccggttataccctgcgtcagttgtgccaggaaatgcac
gacctgtatgcccgtcataacgtgaaacaactgcaaaaagagatgttccgtaaggaacac
ttccctcgcgtcagcatgaatccacaagaagctaactacgcctacttacgcggtgaggtg
gagctggttcgtctgccggatgcagaagggcgtatcgcagccgaaggtgccctgccttat
cctccaggcgtgctgtgtgttgttccgggtgaagtctggggcggtgcagttctgcgttac
ttcattgccctggaagaaggcattaacctgctgccaggttttgcgccggaattacagggg
gtctacatcgaagaacatgacggtcgcaaacaggtctggtgctatgtcatcaaatcaagc
gaaccacaaagcgccctgctgaagggagaaaaattatga
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