Escherichia ruysiae: OSH18_07500
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Entry
OSH18_07500 CDS
T09019
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eruy
Escherichia ruysiae
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eruy03400
]
OSH18_07500 (sbcC)
DNA repair and recombination proteins [BR:
eruy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OSH18_07500 (sbcC)
Archaeal homologous recombinant proteins
OSH18_07500 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
cobW
AAA_21
ABC_tran
nSTAND3
NTPase_1
AAA_22
DUF1192
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WGM53964
LinkDB
All DBs
Position
1570748..1573891
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLEMTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSARTELEKLQAQASGVALLAPEQVQSLTESLQVLTDEEKQLLVTQQ
QEQQSLNWLTRLDELQKDASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIE
EHTAALTHTRQQIEEVNTRLQRTMALRANIRHHAAKQSAELQQQQQNLNAWLHEHDRFRQ
WNNELAGWRAQFAQQASDRKYLRQWQQQLTHAEQKLNALPAISLTLTAAEVAAAQAQHAE
QRPLRQRLIALYGQIVPQQKRLSQLQTAIQSVTQEQTQRNAALTEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYRALEPGVNQSRLLVLENEVK
KLGEEGAALRGQLDALTKQLQRDENEAQSLRQDEQALTQEWHTLTASLSITLQPQDDIQP
WLATQEEHEKQLQLLNQRHELQEQIAAHNQQIIQYQQQIEQRHQQLSAALTGYALALPQE
DEEESWLATRQQEAQGWQQRQNELTELQNRIQQLTPILDTLPQNDELPHSEATVTLENWR
QVHEQCLALQSQRQTLQQQEVLAAQGLQKAQTQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLATQTAETLAQHQQHRPDELALTVTVEQIQQELAQTNQKLRA
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQTTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDNTFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgaaccgtttgccagcaacgggctgtttgcgattaccggcccgactggc
gcggggaaaaccactctgctcgacgccatctgcctggcgctgtatcacgagactccgcgt
ctctccaacgtttcacaatcgcaaaatgatctgatgacccgcgataccgccgaatgtctg
gcggaagtggaatttgaagtgaaaggtgaagcgtaccgcgcgttctggagccaaaatcgg
gcacgtaaccagccggacggtaatttgcaggtgccgcgcgtagagctggcgcgctgtgca
gacggcaaaatcctcgctgataaagtgaaagataagctggaaatgacagcgacgttaacc
gggctggattacgggcgtttcacccgttcgatgctgctttcgcagggacaatttgctgcc
ttcctcaatgccaaaccgaaagaacgcgcggaattgctggaggagttaaccggcaccgaa
atttacggtcaaatctccgcgatggtctttgaacagcataaatcggcccgtactgagctg
gagaaactgcaagcgcaggccagcggtgtcgcattattagcgccagaacaagtgcaatcg
ctgacagaaagtttgcaggtactcactgatgaagaaaaacagttactcgtcacacagcag
caagaacaacaatcgcttaactggttaacgcgtctggatgaattgcaaaaagacgccagc
cgccgtcagcaggcactgcaacaggcgttagccgaggaagaaaaagcgcaacctcaactg
gcggcgctcagtctggcacaaccggcacgaaatcttcgtccgcattgggaacgcatcgaa
gaacacactgcggcactaacgcatactcgtcagcagattgaagaagtaaatactcgctta
cagcgcacaatggcgcttcgcgcaaatattcgtcaccacgcggcgaagcagtcggcagaa
ttacaacagcagcaacaaaatctgaatgcgtggttacacgaacacgaccgcttccggcag
tggaataacgaactggcgggttggcgggcgcagttcgcccaacaggccagcgatcgcaag
tatctgcggcaatggcaacagcaattaacccatgcagagcaaaaacttaatgcccttccg
gcgatctctttaactttaaccgccgccgaagttgccgctgcgcaggcacaacatgccgaa
caacgtccgctgcgtcagcgcctgatcgcactatatgggcagattgttccccagcaaaaa
cgcctgtcgcagctacagaccgctattcagagcgttacgcaggaacagacacaacgtaac
gccgcgctcactgaaatgcgccaacgttataaagaaaagacgcaacagcttgccgatgtc
aaaaccatttgcgagcaggaagcacgcatcaaaaccctggaagctcaacgtgcgcagtta
caggcaggtcagccttgcccactttgtggttccaccagccacccggcggtcgaggcgtat
cgggcgctggaaccgggggttaatcagtctcgattactggtgctggaaaatgaagttaaa
aagctcggtgaagaaggcgcggcgctacgtgggcaactggacgccttaacgaagcagctt
cagcgggatgagaacgaagcacaaagcctccgacaagatgagcaagcacttactcaggaa
tggcatacactaactgccagcctcagtatcaccttgcagccgcaggacgatattcaacca
tggcttgccacccaggaagagcatgaaaagcaactgcaattactcaatcagcgtcatgaa
ttacaggagcaaattgccgcgcacaatcaacaaattatccagtatcaacaacagattgaa
caacgccatcagcaactctctgcggcgttaacgggttacgcgctggcactgccacaagaa
gatgaagaagagagctggttggcgacacgtcagcaagaagcgcagggctggcagcagcgc
cagaacgaattaaccgagctgcaaaaccgtattcaacagctgacgccgattctggacaca
ttgccgcaaaatgatgaactgccacacagcgaagctactgtgacgctggaaaactggcgg
caagttcatgagcaatgtctcgcgttgcaaagccagcggcaaaccttgcagcaacaagag
gttttggcggcgcaaggtctgcaaaaagcccagacacagtttgacaccgcgctacaggcc
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacagacactaacg
caactggaacagctcaagcagaatctggaaaaccagcgtcgtcaggcgcaaacgctggcc
actcaaacagcagaaacgctggcacagcatcagcaacaccgacctgacgagttagctctc
actgtgacggtggagcagattcaacaagagttagcgcaaactaaccaaaagttgcgtgca
aacaccacgagtcaaggcgaaattcgccagcagttgaagcaggatgcagacaaccgtcag
caacaacaaaccttaatgcagcaaattgcccagacaacacagcaggttgaagactggggt
tatctcaattcgctgattggctccaaagagggcgataaattccgtaagtttgcccaaggg
ctgacgctggataatttagttcatctcgctaaccagcaacttacccgcctgcacgggcgc
tatttgttacagcgtaaagccagcgaggcgctggaagtcgaggttgtcgatacctggcag
gcagatgcagtacgcgatacccgaacgctttccggcggagagagttttctcgtcagtctg
gcactggcgctggcgctttcggatctggtcagccataaaacgcgcattgactcgttattc
ctcgatgaaggtttcggcacgctggatagcgaaacgctggataccgcccttgatgcgctg
gatgccctgaacgccagtggtaaaactatcggcgtgattagccacgttgaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaacggcctgggctacagcaaactg
gacaacacgtttgcggtgaaataa
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integrated database retrieval system
