Escherichia ruysiae: OSH18_09320
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Entry
OSH18_09320 CDS
T09019
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
eruy
Escherichia ruysiae
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eruy03021
]
OSH18_09320 (rapA)
Transcription machinery [BR:
eruy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OSH18_09320 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WGM54282
LinkDB
All DBs
Position
1951877..1954783
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEEAGVALREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD
NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT
EGFDDLIKNCREQHETLKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM
NLLDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLNKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQEVHAILQLGEAQIEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELAAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttgga
accgttgtcgcggtggatgcgcgaactgtcactctgcttttcccatctacgggtgaaaac
cgtctgtacgcacgcagtgattcccccgtgacccgcgtgatgttcaaccctggtgatacc
attaccagccacgatggctggcagatgcaagtcgaagaagtaaaagaagaaaatggcttg
ctgacctatatcggtactcgcctggatactgaagaagccggcgtggccctgcgcgaagtt
ttccttgatagcaaactggtgttcagcaaaccgcaggaccgcctgtttgccgggcagatc
gaccgcatggatcgctttgcgctgcgttatcgcgcacgcaagtattccagcgaacagttc
cgtatgccgtacagcggcctgcgcggtcagcgtaccagtctgatcccgcaccagctcaac
atcgctcatgatgttggtcgccgccacgcgccgcgcgttctgctggctgacgaagtgggt
ttagggaaaaccattgaagctgggatgatcctgcatcagcagttgctctctggcgctgct
gaacgtgtgctgattatcgtcccggaaactttacagcatcagtggctggtagaaatgctg
cgccgtttcaacctgcgctttgccctgtttgatgatgagcgttacgccgaagcccagcac
gatgcctacaacccgttcgacaccgaacagctggtgatttgctcgctggattttgcccgc
cgcagcaaacagcgtctggaacatctctgtgaagccgagtgggatctgctggtagtcgat
gaagcgcatcacctggtgtggagcgaggatgcaccgagccgtgaatatcaggccattgaa
caactggcagagcatgtgccgggcgttctgctgctgaccgcaaccccggaacagctgggg
atggaaagccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgatttcgcg
caattcgttgaagagcagaaaaattatcgtccggttgcggacgccgttgccatgctgctg
gcaggtaacaaactgagcaatgacgaactgaacatgctcggtgagatgatcggcgaacag
gatatcgagccgctgttgcaagcagcaaacagcgacagcgaagatgcccagagcgcccgt
caggaactggtttcgatgctgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtaaaaggcttcccgaaacgcgaactgcacaccattaagctgccgctg
ccgacgcagtatcagacggctattaaagtgtccggcattatgggcgcacgtaaaagtgcg
gaagaccgcgcccgcgatatgctctatccggagcgtatttatcaggaatttgaaggcgat
aacgccacctggtggaactttgatccgcgcgttgagtggctgatgggctatctgaccagt
catcgctcacagaaagtgttggtgatctgcgccaaagccgccaccgcgctgcaactagag
caggtgcttcgcgaacgtgaaggtattcgcgcagctgtgttccacgaaggcatgtcgatt
atcgaacgtgaccgcgcagccgcctggttcgccgaagaagataccggcgcacaggtgctg
ctgtgctcggaaatcggttctgaaggacgtaacttccagttcgccagccacatggtaatg
ttcgatctaccgttcaacccagacctgctggagcagcgtattggtcgtctggatcgtatc
ggtcaggcgcacgatattcagatccacgtaccttatctggaaaaaaccgctcagtcggtg
ctggtgcgctggtatcacgaaggtctggatgcgttcgagcacacctgcccgaccggacgt
actatctacgatagcgtgtacaacgatctgattaactacctggcttcacccgatcaaacc
gaaggctttgacgatctgatcaaaaactgccgcgagcaacacgaaaccctgaaagcacaa
ctggagcagggtcgtgaccgcctgctggagatccactccaacggtggcgaaaaagcccag
gcactggcagaaagcattgaagagcaggatgacgataccaacctgatcgccttcgccatg
aacctgctcgatattatcggtattaatcaggacgatcgcggcgacaacatgatcgtgctg
acgccgtccgatcatatgctggtgccggacttcccgggcttgtcggaagacggtattacc
atcacctttgatcgtgaagtggcgctggcgcgtgaagatgcgcagtttattacctgggaa
catccgctgatccgcaacggtctggatctgatcctttctggagataccggtagcagcact
atttcattgttgaaaaacaaagcgttgccggtaggtacgctgttggtggagctgatttac
gtggttgaagcacaagcgccgaagcagttgcagcttaaccgcttcctgccgccgacgccg
gtacgtatgctgttgaataaaaacggcaacaacctggcggcacaggtagagtttgaaacc
tttaaccgtcagcttaacgcagtgaatcgccacaccggtagcaagctggttaacgccgta
cagcaagaggttcacgctatcctgcaactgggtgaagcgcagattgagaagtctgcccgt
gcactgatcgatgcggcgcgtaacgaagctgacgaaaaactgtctgcggaactgtcgcgt
ctggaagcactgcgcgcagtgaacccgaacattcgtgacgacgaactggccgccattgaa
agcaaccgtcagcaggtaatggaaagtctggatcaggcaggctggcgtctggatgccctg
cgtttaatcgttgtgacgcatcagtaa
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