Escherichia ruysiae: OSH18_15820
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Entry
OSH18_15820 CDS
T09019
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eruy
Escherichia ruysiae
Pathway
eruy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OSH18_15820 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eruy03019
]
OSH18_15820 (pnp)
03016 Transfer RNA biogenesis [BR:
eruy03016
]
OSH18_15820 (pnp)
Enzymes [BR:
eruy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OSH18_15820 (pnp)
Messenger RNA biogenesis [BR:
eruy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OSH18_15820 (pnp)
Transfer RNA biogenesis [BR:
eruy03016
]
Prokaryotic type
tRNA degradation factors
OSH18_15820 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WGM51690
LinkDB
All DBs
Position
3317690..3319825
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE
ELNARVAALAEARLSDAYRITDKQERYAQVDVIKFETIATLLAEDETLDENELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcaacacaccgtaactctggaaact
ggcatgatggcgcgtcaagccactgccgctgttatggttagcatggatgacactgcggta
ttcgttaccgttgttggtcagaaaaaagccaaaccaggtcaggatttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccgattcgc
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgttgtttctgtt
aacccgcaggttaacccggatatcgtcgcgatgattggtgcttctgcagcactgtctctg
tctggtattccgttcaatggtccgattggtgctgcccgcgtgggttacatcaatgatcag
tacgtattgaacccgacccaggacgagctgaaagagagcaaactggatctggttgttgcg
ggtactgaagccgctgtactgatggttgaatctgaagctgaactgctgagcgaagaccag
atgctgggcgcagtggtgttcggtcatgaacaacagcaggttgttattcagaacatcaat
gaactggtgaaagaagccggtaaaccgcgttgggactggcagccggagccggtaaacgaa
gagctgaacgcacgcgttgctgcactggctgaagctcgtctgagcgatgcttaccgcatc
accgacaaacaagagcgttatgcacaggttgacgtgatcaaatttgaaaccatcgcgacg
ctgcttgctgaagacgaaaccctggacgaaaacgaactgggtgaaattctgcacgctatc
gagaaaaatgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgacggtcgtgaa
aaagatatgatccgtggtctggatgtccgtactggcgtgctgccgcgtactcacggttct
gcgctgttcacccgtggtgaaactcaggcgctggttaccgcaacgctgggtactgcacgt
gacgcgcaggttcttgatgaactgatgggcgagcgtaccgataccttcctgttccactac
aacttccctccgtactccgtaggcgaaactggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgtggcgtgctggctgtaatgccggatatggacaaa
ttcccgtacaccgtacgtgttgtgtctgaaatcaccgaatccaacggttcctcttctatg
gcttccgtgtgcggcgcttctctggcgctgatggacgcaggtgtgccgatcaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attctgggtgacgaagaccatctgggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcattgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtaatggaacaggcg
atcaacgcgccacgtggcgatatctctgagttcgcgccgcgtatccataccatcaagatc
aacccagacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgccctgacc
gaagaaaccggcacaaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gacggcgagaaagcgaaacatgctattcgtcgtatcgaagagatcactgcagaaatcgaa
gtgggccgcgtctacaatggtaaagtgacccgtatcgttgactttggcgcctttgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcagatcgctgacaaacgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtgccggtgaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaacctgctgca
gcaccggaagctccggctgctgaacagggcgagtaa
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