Erwinia sp. E602: GKQ23_01425
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Entry
GKQ23_01425 CDS
T10706
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
erwe Erwinia sp. E602
Brite
Enzymes [BR:
erwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GKQ23_01425 (gyrB)
DNA replication proteins [BR:
erwe03032
]
Prokaryotic type
DNA Topoisomerases
GKQ23_01425 (gyrB)
DNA repair and recombination proteins [BR:
erwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GKQ23_01425 (gyrB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QUG73750
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Position
3499..5907
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AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIL
VTIHADNSVSVIDDGRGIPTGIHPEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIRREGKVHQQVYVHGVPQAPLSVTGETDLTGTRVRFWPSHQTFTNVT
DFEYEILAKRLRELSFLNSGVSIKLEDKRDGKTDHYHYEGGIKAFVEYLNKNKTPIHPNV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPGDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLFKVKKG
KQEQYIKDMDAMDEYQIAIALDGASLHANASAPALGGAPLESLVAEFNSTRKMIKRMERR
YPSALLNALIYNPTLGDLAAQAPVQSWLDGLVAYLNDNDQHGSSYAGVVRENRELHIFEP
VLRVRTHGVDTDYPLDNEFVLGGEYRKICALGEKLRGLIEEDAFIERGERRQPIASFEQA
IDWLSKESRRGLTIQRYKGLGEMNPDQLWETTMDPDSRRMLRVTVKDAIAADQLFTTLMG
DAVEPRRAFIEENALRAANIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagttctcaaggggctggatgcggtacgc
aagcgcccgggtatgtatatcggcgatacggatgacggcaccggtctgcatcacatggta
ttcgaggtcgtggataacgccattgacgaagcactcgccggtcactgctctgatattctt
gttaccattcatgcggataactctgtctccgtcatcgatgacggccgtggtattccaacc
ggtattcacccggaagagggtatctctgccgctgaagtgatcatgaccgtgctgcacgcc
ggcggtaagttcgacgacaactcgtataaagtgtccggcggcctgcacggcgtgggcgtc
tcggtggtgaatgccctgtctgaaaagctggagctgaccatccgtcgtgaaggcaaagtg
caccagcaggtctacgttcacggtgtgccgcaggccccgctgagcgtgaccggtgaaacc
gacctgaccggtacccgcgtgcgcttctggccaagccatcagacctttaccaacgtcacc
gatttcgaatatgagatcctggccaagcgtctgcgtgagctgtcgttcctgaactccggc
gtgtcgatcaagctggaagataagcgcgatggtaaaaccgaccactaccactatgaaggt
ggtatcaaggcgtttgttgagtatctgaacaaaaacaaaaccccgatccacccgaatgtg
ttctatttctctacagagaaagacggcattggtgtggaagtggcgctgcagtggaacgac
ggcttccaggaaaacatctactgctttaccaacaacatcccgcagcgcgacggcggtacc
cacctggtcggtttccgcaccgcgatgacccgtaccctgaacgcctatatggataaagag
ggttacagcaagaaggccaaggttagcgccaccggtgacgatgcgcgtgaaggcctgatt
gccgtggtgtcggtgaaggtaccggatccgaagttctcctcacagaccaaagacaagctg
gtctcctctgaggtgaaatcggcggttgagcagcagatgaacgaactgctggctgaatac
ctgctggaaaatccgggcgatgctaaaatcgtggtcggcaaaatcatcgacgcggcccgc
gcccgtgaagccgcgcgccgcgcccgcgaaatgacccgccgtaaaggcgcgctggatctc
gccggcctgccgggcaagctggcggactgccaggagcgcgatccggcgctgtctgaaatc
tacctggtggagggtgactctgcgggcggttctgccaagcagggacgtaaccgtaaaaac
caggcgattctgccgctgaagggtaagatccttaacgttgagaaggcgcgcttcgacaag
atgctcgcctcgcaggaagtggccacgctgatcaccgcgctgggctgcggcatcggtcgt
gacgaatacaacccggacaagctgcgctaccacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtaccctgctgctgaccttcttctaccgccagatgccggaa
atcatcgagcgtggccacgtctacatcgcgcagccgccgctgtttaaggtgaagaagggc
aaacaggagcagtacatcaaggatatggacgcgatggacgagtatcagatcgccatcgcc
ctcgacggtgcctccctgcacgctaacgccagcgccccggcgctgggcggcgcgccgctg
gagagcctggtggccgagttcaacagcacgcgtaagatgattaagcgtatggagcgtcgc
tatccgtctgcgctgctgaacgcgctgatctacaatccgaccctcggcgatctggcggca
caggccccggtgcagagctggttagacggcctggtcgcttacctgaacgacaacgatcag
cacggcagcagctatgccggcgtggtgcgcgagaaccgcgaactgcatatttttgaaccg
gtgctgcgcgtgcgtacccacggcgtcgacaccgactacccgctggacaacgagttcgtg
ctgggcggcgaataccgtaagatctgcgcgctgggcgagaagctgcgtggcctgatcgag
gaagacgcctttattgagcgcggcgagcgccgtcagccgattgccagcttcgagcaggcg
atcgactggctgagcaaagagtcacgccgtggcctgaccattcagcgctataaagggctg
ggtgagatgaacccggaccagctgtgggaaaccaccatggatccggacagccgccgcatg
ctgcgcgtgaccgtgaaggatgcgattgccgctgaccagctgttcaccaccctgatgggt
gatgcggtagaaccgcgccgcgcctttatcgaagagaatgcgctgcgcgcggccaatatc
gatatctaa
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