Erwinia sp. E602: GKQ23_03210
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Entry
GKQ23_03210 CDS
T10706
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
erwe Erwinia sp. E602
Pathway
erwe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GKQ23_03210 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erwe03021
]
GKQ23_03210 (rpoA)
03400 DNA repair and recombination proteins [BR:
erwe03400
]
GKQ23_03210 (rpoA)
Enzymes [BR:
erwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GKQ23_03210 (rpoA)
Transcription machinery [BR:
erwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GKQ23_03210 (rpoA)
DNA repair and recombination proteins [BR:
erwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GKQ23_03210 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QUG74079
LinkDB
All DBs
Position
394445..395434
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHLICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aacgcgctgcgccgtattctgctttcatcaatgccgggttgcgcggtgaccgaggttgaa
attgatggtgtactgcatgagtacagcaccaaagagggtgtacaggaagatatcctggaa
atcctgctcaaccttaaaggtttggcggtaagagttcagggcaaagatgaagttattctt
actctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacctgatctgccatctgaccgatgagaacgccgctatc
agcatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgatcggtcgtctgttagtcgacgcctgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgttgaacagcgtactgacctggacaag
ctggtcatcgaaatggaaaccaacggcactatcgatcctgaagaagcgatccgccgtgcg
gctaccatcctggcagaacaacttgaagctttcgttgacttacgtgatgttcgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgcttaaaacgcctaaccttggtaaaaaatctctt
actgagattaaagatgtgctggcttctcgtggtctgtctctgggcatgcgcctggaaaac
tggccgccagctagcattgctgatgaataa
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