Erwinia sp. E602: GKQ23_03880
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Entry
GKQ23_03880 CDS
T10706
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
erwe Erwinia sp. E602
Pathway
erwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKQ23_03880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erwe03019
]
GKQ23_03880 (pnp)
03016 Transfer RNA biogenesis [BR:
erwe03016
]
GKQ23_03880 (pnp)
Enzymes [BR:
erwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GKQ23_03880 (pnp)
Messenger RNA biogenesis [BR:
erwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GKQ23_03880 (pnp)
Transfer RNA biogenesis [BR:
erwe03016
]
Prokaryotic type
tRNA degradation factors
GKQ23_03880 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
aRib
OB_RRP5_4th
OB_PDCD11
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QUG74193
LinkDB
All DBs
Position
537033..539162
Genome browser
AA seq
709 aa
AA seq
DB search
MLNPIVKKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKSKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALALSGLPFNGPIGAARVGYINDQYVLNPTSDELKVSKLDLVVA
GTQGAVLMVESEAEILSEEQMLGAVVFGHDQQQIVIDNINALVAEAGKPHWDWTPEAVNE
ALTARIAALAETRLSDAYRITEKQERYAQVGVIKSETTAALQAEDESLDAGEISDILHTL
EKNVVRSRILRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKGDA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKDEDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISGPRGDISQFAPRIHTIKISVDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEASEQAQPEAAASEAPAAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgatcgttaaaaaattccagtatggccagcacaccgtcacgcttgaaacc
ggcatgatggctcgccaggcaacggctgccgttatggtcagcatggacgacaccgccgtg
ttcgtgaccgtcgtcggtcagaaaaaatctaagccaggccaggatttcttcccgttaacc
gttaactaccaggagcgtacctacgctgccggtcgtattccgggcagcttcttccgtcgc
gaaggccgtccaagcgaaggcgagaccctgacctcacgcctgattgaccgcccaatccgc
ccactgttcccggaaggcttcgttaacgaagtgcaggtgattgccaccgtggtttccgtt
aacccacaggttaacccggatatcgtggcgatgatcggtgcttcagcggcgctggcgctg
tctggcctgccgttcaacggtccaatcggtgcggcccgcgttggctacatcaacgaccag
tacgtgctgaacccaaccagcgacgagctgaaagtgagcaagctggatctggtggttgcc
ggtacccagggcgcggtactgatggttgaatctgaagcggaaatcctcagcgaagagcag
atgctgggcgccgtggtgttcggccacgaccagcagcagatcgtcatcgacaacatcaac
gcgctggtcgccgaagccggcaagccgcattgggactggacgccagaagccgtcaacgaa
gcgttaactgcacgtatcgccgcgctggctgaaacccgcctgagcgacgcataccgcatc
accgaaaaacaggagcgttacgctcaggttggcgtgatcaagtctgaaaccactgcagca
ctgcaggcggaagacgaatcactggacgccggtgaaatcagcgacatcctgcacacgctg
gagaagaacgtggtgcgtagccgcattctgcgtggcgaaccgcgtatcgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgtaccggcgtactgccacgtacccacggctct
gcgctgttcacccgtggtgaaacgcaggcgctggtcactgccactctgggtaccgcacgt
gatgcgcagaacctggatgagctgatgggcgagcgtaccgacaacttcctgttccactac
aacttccctccgtactctgtcggtgaaaccggcatggtcggctcgccgaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgtggcgtgctggccgttatgccgaaaggcgacgcg
ttcccgtacaccgtgcgcgtggtgtctgaaatcaccgaatctaacggttcctcgtcaatg
gcgtccgtgtgcggcgcatccctggcgctgatggatgcgggcgtgccaatcaaggccgcc
gtagccggtattgcgatgggcctggtgaaagacgaagacaacttcgtagtcctgtctgat
atcctcggtgacgaagaccacctgggcgatatggactttaaagtggccggtagccgtgaa
ggtatcaccgcgctgcagatggacatcaaaatcgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtctgcatatcctcggcgtgatggaacaggcg
atcagcggaccgcgtggcgatatctctcagtttgcaccacgtatccacaccatcaagatc
agcgttgataagatcaaagacgtgatcggtaaaggtggctcggtgatccgtgcgctgacc
gaagagaccggcacaaccatcgaaatcgaagatgacggtacggtgaaaattgccgcaacc
gacggtgagaaggcgaaattcgctatccgccgtatcgaagagatcaccgcagaaatcgaa
gtgggccgtatctacagcggtaaggttacccgcatcgttgacttcggtgccttcgtggcg
atcggtggcggtaaagaaggtctggtccacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgactacctgcagatgggtcaggaagtaccggttaaggtactggaagttgac
cgtcagggccgcgtgcgcctgagcatcaaagaagccagcgagcaggcacagcctgaagcc
gcagcttctgaagcacctgcagcagaataa
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