Erwinia sp. E602: GKQ23_06970
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Entry
GKQ23_06970 CDS
T10706
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
erwe Erwinia sp. E602
Pathway
erwe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GKQ23_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erwe03021
]
GKQ23_06970
Transcription machinery [BR:
erwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GKQ23_06970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_28
Sigma70_ECF
Fe_dep_repress
HTH_31
PhyR_sigma-like
Rv2175c_wHTH
HTH_10
HTH_24
PAX
GerE
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QUG74754
LinkDB
All DBs
Position
1225364..1225876
Genome browser
AA seq
170 aa
AA seq
DB search
MASKEIATSHGFAQQLYMEHHGWLCHWLRQKVSCAHHAEDLAQDTFISILVSPQLLAIRE
PRPFLATVARRLVANFYRRKKIEESYLQALSELPEASVPSPEVRQQTIEMLEQLDQALDG
LPAHVREAFLLAHLQGMRYGDIAERLRVSASSVKQYLQRANLHCFFALSA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaagagatcgcgacctctcacggttttgcccaacagctttatatggagcat
cacggctggctgtgccactggctacgtcagaaggtcagctgtgcgcatcatgctgaggat
ctggcgcaggacacctttatcagcattctggtcagcccgcagctgctggcgattcgggaa
ccccgaccgtttttagccaccgtggcgcggcggctggtggccaacttctaccggcgtaaa
aaaatcgaggagagctacctgcaggcgctcagcgagctgccggaggccagcgtaccctcg
ccggaagtgcgccagcagacgattgagatgctggaacagctggaccaggcgctggacggc
ctgcctgcccacgtgcgcgaagccttcctgctggcgcacctgcaggggatgcgttacggc
gatattgccgagcgcctgcgggtatcagccagctcggtaaaacagtatctgcagcgagcc
aacctgcactgcttctttgcgctgtcagcatga
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