Erwinia sp. E602: GKQ23_08635
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Entry
GKQ23_08635 CDS
T10706
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
erwe Erwinia sp. E602
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erwe03400
]
GKQ23_08635
DNA repair and recombination proteins [BR:
erwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
GKQ23_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_16
AAA_22
Zn_Ribbon_1
zf-tcix
DUF7577
DZR
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
QUG75050
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Position
complement(1585458..1587212)
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AA seq
584 aa
AA seq
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MSFTLRPYQQEAVDATIAYFRRSAEPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYQAYGLQADIFAAGLQRKESQAKVVFGSVQSVARNLAAFDAEFSLLIVDECH
RISDADDSQYQQILGHLRARNPQLRLLGLTATPYRLGKGWIYQFHYHGMVRGSEQALFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLQAQENGLFSEADLNRELKQQQRITPH
IIAQIVEFAQKRQGVMIFAATVEHAREVLGLLPESKALISAGTPGPERDALISAFKAREL
RYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKQDCLILDYAGNPH
DLYTPEVGAPKGKSDNQPVQVFCPGCGFANTFWGKTTADGTIIEHFGRRCQGVLEDDDGH
REQCDYRFRFKNCPHCNAENDIAARRCRECDAVLVDPDDMLKAALKLKDALVLRCAAMQL
EAGRDEHGEWLKARYFDEEATEVSERFRLKSPAQRTAFEQLFLRPHQRAPGVPLGWQTAA
DIVALQPLLRHPDFVVARKQRHFWQVREKVFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacgttacgcccctatcaacaggaggcggtggatgccaccatcgcctacttc
cgccgctcggccgaaccggcggtcatcgtgctgcctaccggggccggtaaaagcctggtg
atcgccgagctggcccgcgtggcgcgcggccgggtgctggtgctggcccacgtcaaagag
ctggtggcgcagaaccacgcgaaatatcaggcctacggcctgcaggcggatattttcgcc
gccggcctacagcgcaaagagagccaggcgaaagtggtgtttggcagcgtgcagtcggtg
gcgcgcaacctggccgcgtttgacgccgaattttcactgctgatcgtcgacgagtgccac
cgcatcagcgacgccgacgacagccagtaccagcagatcctcggccatctcagagcgcgc
aacccgcagctgcgcctgctggggctgaccgccaccccctaccggctgggcaaaggctgg
atctaccagtttcactatcacggcatggtgcgcggcagcgagcaggcgctgttccgcgac
tgcatctacgagctgccgctgcgctatatgattaaacacggcttcctggtaccgccggag
cggctggacatgccggtggtgcagtacgacttcagccgcctgcaggcgcaggagaacggc
ctgttcagcgaagccgacctcaaccgcgaactgaagcagcagcagcgcatcacgccgcac
atcattgcgcagatcgtcgaattcgcccagaagcgccagggggtgatgatcttcgccgcc
accgtggagcacgcccgcgaggtgctcggcctgctgccggagagtaaagcgctgatcagc
gcaggaaccccggggccggagcgcgacgcgctgattagcgcctttaaggcgcgcgagctg
cgctacctggtcaacgtggcggtgctgaccaccggctttgacgcgccgcacgtcgacctg
atcgctatcctgcgccctaccgagtcggtcagcctctatcagcagatcgtcggccgcggg
ctacgcctgagccccggcaaacaggactgcctgatcctcgactatgccggcaatccgcac
gacctgtataccccggaagtcggcgcgccgaagggcaaaagcgacaaccagccggtgcag
gtgttctgccccggctgcggtttcgccaacaccttctggggcaaaaccaccgcggacggc
acgataatcgaacactttggccgccgctgtcagggggtgctggaggatgatgacggccac
cgcgaacagtgcgactaccgcttccgtttcaaaaactgcccgcactgcaacgcggaaaac
gacatcgccgcccgccgctgtcgcgagtgcgacgcggtgctggtagacccggacgatatg
ctgaaggccgcgctgaagctgaaggatgcgctggtgctgcgctgtgcggcgatgcagctg
gaggccggccgcgacgagcacggcgaatggctgaaggcgcgctactttgacgaagaggcc
accgaggtcagcgaacgcttccggctgaaaagcccggcgcagcgtaccgccttcgaacag
ctgttcctgcgtccgcaccagcgcgcgccgggggtaccgctcggctggcagacggcggcg
gatatcgtcgccctgcaacccctgctgcgccacccggactttgtggtggcgcgcaaacag
cgccacttctggcaggtgcgcgaaaaggtgttcgactatcaggggcgctatcgccgtgcg
aatgagttgcgttaa
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