Erwinia sp. E602: GKQ23_09080
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Entry
GKQ23_09080 CDS
T10706
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
erwe Erwinia sp. E602
Pathway
erwe00521
Streptomycin biosynthesis
erwe00523
Polyketide sugar unit biosynthesis
erwe00525
Acarbose and validamycin biosynthesis
erwe00541
Biosynthesis of various nucleotide sugars
erwe01100
Metabolic pathways
erwe01110
Biosynthesis of secondary metabolites
erwe01250
Biosynthesis of nucleotide sugars
Module
erwe_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GKQ23_09080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GKQ23_09080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GKQ23_09080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GKQ23_09080 (rfbB)
00525 Acarbose and validamycin biosynthesis
GKQ23_09080 (rfbB)
Enzymes [BR:
erwe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GKQ23_09080 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
DUF6301
Motif
Other DBs
NCBI-ProteinID:
QUG75133
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All DBs
Position
1692934..1694022
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AA seq
362 aa
AA seq
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MKILVTGGAGFIGSAVVRHIINCTADSVVNLDKLTYAGNPESLVSVEADPRYAFEQADIC
DAQAMRELFARHQPDAVMHLAAESHVDRSISGPADFIHTNIVGTSVLLEAARGYWNELDQ
PRKAAFRFHHISTDEVYGDLPHPDEVSDGHPLPLFTETTPYAPSSPYSASKAASDHLVRA
WLRTYGLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGKGDQIRDWLYVDDHA
RALYTVLTRGEVGETYNIGGHNEKQNLQVVETICDLLDELVPKETPYRQQIAYVADRPGH
DRRYAIDAGKIARELGWQPQETFDSGIRKTVQWYLDNAEWVANVKSGAYQAWIDHNYQGR
QQ
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattttagtgaccggcggagccggatttatcggctctgccgtagtacgtcatatt
attaactgcacagccgacagcgtggtgaatctcgacaaactgacctacgccggcaatcca
gagtcgctggtcagcgttgaagccgacccgcgctacgcctttgagcaggccgatatctgc
gacgctcaggcgatgcgggagctgtttgcacgtcatcagcccgatgcggtgatgcacctg
gcggcagagagccacgttgaccgctcgattagcggtccggcggactttatccataccaat
atcgtcggtaccagcgtgctgctggaagcggctcgcggctactggaatgaactggatcag
ccgcgtaaagcggcgttccgcttccaccatatctccaccgatgaagtgtacggtgacctg
ccgcacccggacgaagtcagcgacgggcaccccctgccgctgtttaccgaaaccaccccc
tatgcgccaagcagcccctactctgcgtctaaggccgcctccgatcacctggtccgcgcc
tggctgcgcacctacggcctgccgacgctggtgaccaactgttcaaacaactacggcccg
tatcatttccccgagaaactgatcccgctggtgatcctcaacgcgctggcgggcaaaccg
ctgccggtgtatggcaagggtgaccagatccgtgactggctctacgtcgacgatcacgcc
cgtgcgctctataccgtactgacccgtggtgaagtgggggagacctataatatcggcggc
cacaacgagaagcagaacctgcaggtggtggaaaccatctgcgatttgctggatgagctg
gtgccgaaagagacgccataccgccagcagatcgcttacgtggccgaccgccctggccac
gaccgccgctacgccattgacgcgggcaaaatcgcccgtgaactgggctggcagccgcag
gaaaccttcgacagcggcatccgcaaaaccgtgcagtggtatctggataacgccgaatgg
gttgccaacgtgaaaagcggcgcctatcaggcgtggatcgaccacaactatcagggtcgt
cagcaatga
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