Erwinia sp. E602: GKQ23_12330
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Entry
GKQ23_12330 CDS
T10706
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
erwe Erwinia sp. E602
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erwe03000
]
GKQ23_12330
Transcription factors [BR:
erwe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GKQ23_12330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HemN_C
Cupin_1
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QUG75730
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Position
2408343..2409164
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AA seq
273 aa
AA seq
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MTVLHSVDFFPAGHCPVAIEPRAPQGSFPEHYHDDFHEIVIVEQGSGIHVFNGQSQPLCG
GCVCFVRNHDRHLYEQTDNLCLTNVLYRGPEAFHFLSGLQQLLPAEQNGHYPSHWRISSK
VLAQAHQLTAQMASPLEEGFAAQATREMQFMQLLLLLRQGSSSAQADDHEGRLRALLDWL
ADHYSEEIDWEALADRFALSLRTLHRQLKQQTGSTPQRYLNRLRLLEARHLLRHSDMRIT
DIAFQCGFGDSNHFSTLFKREFGSAPRTLRQHD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattgcacagcgttgacttttttccggccggtcactgtccggtggcgattgaa
ccgcgggccccgcagggcagcttccccgagcactatcacgatgacttccatgagattgtg
atcgttgaacagggttcggggatccacgtgtttaacggccagtcgcagccgctgtgcggc
ggctgcgtctgctttgtgcgcaatcacgatcgccatctgtatgagcagaccgacaacctg
tgcctgaccaacgtgctgtaccgcgggccggaggcgttccatttcctctccgggctgcag
cagctgttgccggccgagcagaacggccactatccgtcgcactggcgcatcagcagcaag
gtgctggcccaggcgcatcagctgaccgcgcagatggccagcccgcttgaagagggtttt
gccgcgcaggccacgcgtgagatgcagtttatgcagctgctgctgttgttgcgtcaggga
agcagcagcgcgcaggcggacgatcatgaggggcgtttgcgcgcgctgctggactggctg
gccgaccactacagcgaggagatcgactgggaggcgctggccgatcgttttgcgctgtcg
ctgcgtaccctgcaccggcagttgaagcagcagaccggcagtacgccgcagcgttatctg
aaccgtctgcgcctgctggaggcgcgccatctgttgcgccacagcgatatgcgcattacc
gatatcgcttttcagtgtggatttggtgacagcaatcacttttcaacgctgtttaagcgt
gagtttggcagcgcaccgcgtacactgcgtcaacatgactga
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