Erwinia sp. E602: GKQ23_12740
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Entry
GKQ23_12740 CDS
T10706
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
erwe Erwinia sp. E602
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erwe03016
]
GKQ23_12740
Enzymes [BR:
erwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GKQ23_12740
Transfer RNA biogenesis [BR:
erwe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GKQ23_12740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
QUG75809
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Position
2502652..2504589
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AA seq
645 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRV
SAVLQTDKDREVADPETLIEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIQCRAERDVKH
DFQTGDWAVAEMRRHPLKGDRTFYAELTEFITTGDDHLAPWWVTLSRHTLEREAPDVATP
EEMLDECLPREDLTGLDFVTIDSASTEDMDDALYVEETAEGNLLLTIAIADPTAYVPVGS
KLDAIAAGRAFTNYLPGFNIPMLPRQLSDDICSLRPNVRRPVLACRVTLAADGTPQGEPH
FFAAWIESKAKLAYDNVSDWLENSGDWQPESEAIAQQIRLLHKVCLARCEWRQTHALVFK
DRPDFRFLLGEKGEVLDIIAEHRRIANRIVEESMILANVCAASVLRDKLGFGIYNVHLGF
DALNAEQAAAVLANHGVTADPQAIATLEGFRVLRRELDTHPTQFLDSRIRRFQSFAEVST
TPGPHFGLGLDAYATWTSPIRKYGDMVNHRLLKAIIKGEPAEKPADELTVKMAERRRQNR
MAERDVGDWLYSRFLQNAAGSEQRFSAEVIDVSRGGMRVRLQDNGAVAFIPAPFIHAVRD
ELVCSNENGTVMVKGEVAYRVTDLIEVTIAEVRMETRSIVARPAA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctcaaagagaaactccactcccagacgccg
cgtgttgagggtgtggtaaaaggcactgagaaaggctttggcttcctggaagtcgacgca
cagaaaagctactttattccgccgccgtttatgaaaaaagtcatgcacggtgaccgcgtc
tccgcggtgctgcagaccgataaggatcgtgaagttgccgatccggaaacgctgattgag
ccgttcctgacgcgctttgttggccgggtgcagaagaaagatgaccgcctgtcgatcgtt
cccgatcatccgctgctgaaagatgccatccagtgccgcgccgagcgtgacgtgaagcat
gacttccagaccggtgactgggcggtggccgagatgcgccgccatccgctgaagggcgac
cgcaccttctacgctgaactgaccgaatttatcaccaccggtgacgatcacctggcaccg
tggtgggtgacactgtcacgccatacgctggagcgtgaagctccggacgtcgctaccccg
gaagagatgcttgacgagtgcctgccgcgcgaagaccttaccggcctggacttcgtaacc
atcgacagcgccagcaccgaagatatggacgatgcgctgtatgtggaagaaacggcagaa
ggcaacctgctgctgaccatcgccattgccgacccgaccgcctatgtgccggtgggcagc
aagctggatgcgatcgccgccggacgcgcctttaccaactatctgccgggcttcaatatt
ccgatgctgccgcgccagctgtctgacgacatctgctcgctgcgcccgaacgtgcgccgc
ccggtgctggcctgccgcgtgacgctggccgccgacggtacgccgcagggtgaaccgcac
ttcttcgccgcctggatcgaatcgaaagccaaactggcctatgacaacgtctcagactgg
ctggagaacagcggcgactggcagccggaatcagaagccatcgcacagcagatccgcctg
ctgcataaggtgtgcctggcacgctgcgaatggcgccagacccacgcgctggtgttcaag
gaccgccctgacttccgcttcctgctgggcgaaaaaggcgaagtgctggacatcattgcc
gagcaccgccgcatcgccaaccgtatcgtggaagagtcgatgatccttgccaacgtctgc
gccgccagcgtgctgcgcgacaagctgggcttcggcatctacaacgttcacctcggcttt
gacgcgctgaacgccgaacaggccgccgccgtgctggccaaccacggcgtcaccgctgac
ccgcaggcgatcgccacgctggaaggcttccgcgtactgcgccgcgagctggacacccat
ccgacccagttcctcgacagccgcatccgtcgtttccagtcgtttgccgaagtcagcacc
acgccggggccgcactttggccttggcctggacgcgtacgccacctggacctcaccgatc
cgtaagtatggcgatatggtcaaccatcgtctgttgaaagccattatcaaaggcgagccg
gcggaaaaacctgccgacgagctgacggtgaagatggctgagcgccgccgccagaaccgc
atggccgagcgtgacgtgggcgactggctctactcgcgcttcctgcagaatgcggccggc
agcgagcagcgtttcagcgccgaagtgatcgacgtttcacgcggtggcatgcgcgtgcgc
ctgcaggataacggcgcggtggcctttatcccggcgccgttcattcacgcggtgcgtgat
gagctggtgtgcagcaacgaaaacggtacggtgatggtgaaaggtgaagtcgcctaccgc
gttaccgacctgattgaggtcaccatcgccgaagtgcgtatggagacccgcagcatcgtg
gcccgcccggctgcctga
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