Erwinia sp. E602: GKQ23_16245
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Entry
GKQ23_16245 CDS
T10706
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
erwe Erwinia sp. E602
Pathway
erwe00541
Biosynthesis of various nucleotide sugars
erwe01100
Metabolic pathways
erwe01250
Biosynthesis of nucleotide sugars
Module
erwe_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GKQ23_16245 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
erwe01005
]
GKQ23_16245 (kdsB)
Enzymes [BR:
erwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GKQ23_16245 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
erwe01005
]
Lipid A
GKQ23_16245 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
QUG76457
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Position
complement(3210805..3211551)
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AA seq
248 aa
AA seq
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MSFVAIIPARYASTRLPGKPLVDIHGKPMVVHVMERALESGADRVIVATDNQDVARAVEA
AGGEVCMTRADHHSGTERLAEVIDRYQFADDTVIVNVQGDEPMIPPVIVRQVAENLAQSS
AGMATLAVPITSAEEAFNPNAVKVVRDANGYALYFSRATIPWDRERFSVSKETVGDSFLR
HIGIYAYRAGFIRRYVSWEASPLEQIELLEQLRVLWYGEKIHVDVAKAIPSVGVDTPEDL
LRVREAMR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgtcgcgattattccagcgcgctatgcctccacgcgcctgccgggtaaaccg
ctggttgatattcacggtaagccgatggtggtgcacgtgatggagcgggcgctggagtcc
ggcgccgatcgggtgatcgtggccaccgacaatcaggacgtggcgcgggcggtggaagcg
gcgggtggcgaagtgtgtatgacccgtgccgaccaccattcgggtacggagcggctggca
gaagttatcgatcgctatcagttcgccgatgacacggtgatcgttaacgtgcagggcgat
gagccgatgatcccgccggtgatcgtccgtcaggttgccgaaaatctggcgcagagcagc
gccggcatggccacgctggcggtgccgattacctctgcggaagaggcattcaaccctaat
gcggtgaaggtggtgcgtgatgccaacggctacgcgctctacttctcccgcgccaccatc
ccgtgggaccgcgaacggttcagcgtctcgaaagagaccgttggcgatagcttcctgcgc
catattggcatttatgcctatcgcgccggctttatccgccgctacgtcagctgggaagcc
agcccgctggagcagatcgagctactggagcagctgcgcgtgctgtggtacggcgagaaa
attcacgttgacgtcgccaaagcgatccccagcgttggcgtagacacgccggaagatctg
ctgcgggtgcgcgaagcgatgcgttaa
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