Erwinia sp. E602: GKQ23_19350
Help
Entry
GKQ23_19350 CDS
T10706
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
erwe Erwinia sp. E602
Pathway
erwe03030
DNA replication
erwe03430
Mismatch repair
erwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GKQ23_19350 (dnaE)
03430 Mismatch repair
GKQ23_19350 (dnaE)
03440 Homologous recombination
GKQ23_19350 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erwe03032
]
GKQ23_19350 (dnaE)
03400 DNA repair and recombination proteins [BR:
erwe03400
]
GKQ23_19350 (dnaE)
Enzymes [BR:
erwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GKQ23_19350 (dnaE)
DNA replication proteins [BR:
erwe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GKQ23_19350 (dnaE)
DNA repair and recombination proteins [BR:
erwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GKQ23_19350 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QUG77015
LinkDB
All DBs
Position
complement(3865657..3869139)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTNPLVKHAAKMNMPAIGITDFTNLCGLVKFYGTAHGQ
GMKPIIGADFNVASVAMGDELSQITVLAADNDGYQNLTLLISRAYQRGYGPAGPTIDRDW
LAEHQQGIILLSGGRRGDVGKMLLRGNAAMVAECLGFYQQHFPDRYYLELIRTGRPDEES
YLHAAVELAIAEGIPVVATNEVCFLQETDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGEMTTEDFLVLKSQEGL
EERLEFLFPDPEVRAARRPEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMEKRDSVIEHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINARRTKEGLDPVDIATIPLEDQKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNEAGEIVYGIGAIKG
VGEGPIEAIIESRNEGGYFRELFDLCARTDTKKLNKRVLEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEATGQADMFGVLAEAPEQVEKSYADVTPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGQRLKDMHPTDRGKMTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKFQHMLEKDRILIVSGQVSFDDFNGGLKMMARDMMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARAKLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccccgttttattcatttacgcgtgcacagcgactactccatgatcgatgga
ctggcgaagacgaacccgttggtgaaacacgcggcgaagatgaatatgccggccatcggc
atcaccgatttcaccaacctgtgcgggctggtgaaattttacggcaccgcgcacggtcag
gggatgaaaccgattatcggcgctgactttaacgtggccagcgtggcaatgggcgatgaa
ctgtcgcagatcaccgtgctggcggccgataatgatggctatcagaatctgacgctgctg
atctcccgtgcctatcagcgcggctatggcccggcagggccgaccatcgatcgcgactgg
ctggccgaacatcagcaggggattatcctgctctccggcggccgccgtggcgacgtcggt
aaaatgctgttgcgcggcaacgccgcgatggtcgccgagtgtctcggcttctatcagcag
cattttcccgatcgctactacctggagctgatccgcaccgggcggccggatgaagagagt
tacctgcacgcggcagtggaactggcgattgccgagggcattccagtggtggccaccaac
gaggtctgtttcctgcaagaaaccgactttgacgcccatgaaattcgcgtggccattcac
gacggttttaccctcgacgatccgaaacgtccccgtaactacagcccgcagcagtatatg
cgcagcgaagaggagatgtgtgagctgttttcggacatcccggaagcgctggaaaacagc
gtagagatcgcccgccgctgcaacgttaccatccgcctgggcgagtacttcctgccgcag
tttccaaccggtgagatgaccaccgaagatttcctggtgctgaagtcgcaggagggcctg
gaagagcggcttgagttcctgttccccgatcctgaggtgcgcgccgcccgccgcccggag
tatgacgagcgtctggatattgagctcaacgtgattaaccagatgggcttcccgggctac
ttcctgatcgttatggagtttatccagtggtcgaaggataacgacgtaccggtcgggccg
gggcgcggctccggtgccgggtcgctggtcgcctacgcattgaaaatcaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgtgtttccatgccc
gacttcgacatcgacttctgtatggagaagcgcgacagcgtgattgagcacgtggcggaa
atgtacggccgtgaagcggtttcgcagatcatcaccttcggtaccatggccgccaaagcg
gtgatccgcgacgttggccgcgtgctgggccacccgtacggcttcgttgaccgcatctcc
aagctggtgccgcctgacccgggcatgacgctggaaaaagcctttgccgccgaaccgcag
ctgccggaaatctacgaggcggatgaagaggtcaaggcgctgatcgatatggcgcgcaaa
ctggaaggcgtgacgcgtaacgccggtaaacacgccggtggcgtggtgatcgcgccgacc
aaaatcaccgattttgcgccgctatactgcgatgagaacggccagttcccggtcacccag
ttcgataagaacgacgtggagtacgcaggcctggtgaagttcgacttccttggcctgcgc
acgctgaccatcatcgactgggcgctggcgatgatcaacgcccggcgcaccaaagaaggg
ctggatcctgtcgatattgcgacgatcccgcttgaagatcagaaaagtttcgatatgctg
cagcgctcggaaaccaccgccgtattccagctggaatcccgcggcatgaaggatctgatc
aagcgcctgaagccggactgtttcgaagatatgatcgccctggtggcgctgttccgtccg
gggccgctgcagtcggggatggtcgacaactttattgaccgtaagcacgggcgtgaggcg
atctcctacccggatattcagtggcagcatgagtcgctgaagccggttctggaaccgacc
tatggcatcatcctctatcaggaacaggtgatgcagattgcccaggtgctggcgggctac
agccttggcggcgcggacatgttgcgccgtgcgatgggtaaaaagaacccggtcgagatg
gccaagcagcgcggcggctttgaggatggtgcgaaatcgcgcggcattgacggcgagctg
gcgatcaaaatcttcgacctggtggaaaaattcgccggctacggctttaacaagtcgcac
tctgccgcttatgcactggtctcctaccagacgctgtggctgaaggcgcactacccggcg
gagtttatggcggcagtaatgaccgctgatatggataacaccgagaaagtggttggcctg
gtggacgagtgctggcggatggggctgaaggtgctgccgccggacattaactccggcctt
tatcagttccacgtcaacgaagccggtgagatcgtttacggcatcggcgcgattaagggc
gtcggcgaaggcccgattgaagcgattattgagtcacgcaacgagggcggctatttccgc
gagttgtttgacctctgtgcgcgcaccgacaccaaaaagctgaataagcgggtgctggaa
aaactgattatgtccggcgcgtttgaccggcttggcccgcaccgtgccgcgctgatgagc
gcgctgccggacgcgctgaaggccgccgatcagcacgctaaagcagaggcgacagggcag
gccgatatgttcggcgtgctggccgaggcgccggagcaggtagagaagtcgtatgccgac
gtgacgccgtggccggagcagatccagctggatggcgaaagggagactttaggtctttac
ttaaccgggcatccgattaaccagtatctgaaagaaattgagcgctatgtcggtggacag
cgcctgaaagacatgcacccgaccgatcgcggcaagatgaccacggcggccggtctggtg
gtggcggcccgcgtaatggtaacaaaacgcggtaaccgtattggcatctgcaccctggac
gaccgctccggtcgtctggaagtgatgttgtttacagatgcgttggataagttccagcat
atgctggagaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcaac
ggcgggcttaaaatgatggcccgcgatatgatggacatcgatgaagcccgtgaaaaatat
gcacgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccgt
ctccgtcaatccctggaaccccatcgttcggggacaattccggtacatctctactatcag
agagaggatgcgcgggcgaagttgcgcttcggtgcaacctggcgcgtgtcgccgagcgat
cgtttgttaaacgatcttcggtcgttgataggatcggagcaggtggaactggaatttgac
taa
DBGET
integrated database retrieval system
