Erwinia sp. E602: GKQ23_19600
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Entry
GKQ23_19600 CDS
T10706
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
erwe Erwinia sp. E602
Pathway
erwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GKQ23_19600 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erwe03019
]
GKQ23_19600 (pcnB)
Enzymes [BR:
erwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GKQ23_19600 (pcnB)
Messenger RNA biogenesis [BR:
erwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GKQ23_19600 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QUG77061
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All DBs
Position
3926554..3927990
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AA seq
478 aa
AA seq
DB search
MSLSRCPIFTRVANFCRKVLSRDSVLPVAEVEEVRQMTVIPRDRHTISRKDISENALKVL
YRLNKAGFEAYLVGGGVRDLLLGKKPKDFDVTTNATPEQMRKLFRNCRLVGRRFRLAHVM
FGPEIIEVATFRGHHEAEAQPEDDRNSSQRGQNGMLLRDNIFGSIEDDAQRRDLTINSLY
YSVADFSVRDYVGGLNDLQQGIIRMIGDPETRYREDPVRMLRVVRFAAKLDMRVAAETAE
PIPRLATLLRDIPAARLFEEALKLLQAGHGYQTYLRLREYQLFQPLFPMITRNFTEQGDS
NMERMILQVLKNTDTRISNQMRVNPAFLFAAMFWYPQLEAAQKIAQESGLAYYDAFALAM
NDVLDEACRSLAIPKRITTLVRDIWQLQLRLSRRHGKRAWKLMEHPKFRAAYDLLALRAE
VENNSELHRLTTWWGEFQVSAPPQQKTMLNTLGDDPDPRRRTRRPRKRAPRRDYSSNE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttgtcactatcgaggtgtcccatttttacccgagttgctaatttttgccgaaaggttctc
agtcgcgatagcgtgttgccggtagccgaggtagaggaagtgcgtcagatgaccgttatc
cctcgcgatcgccatactatctcgcgcaaggacatcagcgaaaacgccctcaaggtgctg
taccgcctgaacaaagccggttttgaggcctatctggtcggcggcggcgtgcgcgatctg
ctgctgggtaagaagccgaaagatttcgatgtgaccaccaacgccaccccggagcagatg
cgtaagctgttccgcaactgccggctggtcggccgccgtttccgcctggcccacgtcatg
ttcggcccggaaatcattgaggtcgcgaccttccgtggccatcacgaagccgaagcacag
ccagaagatgaccgcaacagctcgcagcgcggccagaacggcatgctgctgcgcgacaat
attttcggttcgatcgaagatgacgcccagcgccgcgatctgaccatcaacagcctgtac
tacagcgtcgccgactttagcgtgcgcgactacgttggcgggctgaacgacctgcagcag
ggcattatccgcatgatcggcgatccggagacgcgctaccgcgaagatccggtacgcatg
ctgcgcgtggtgcgctttgccgccaaactggatatgcgcgtggcggcggaaaccgccgag
ccgattccgcgcctggcgacgctgctgcgtgatatccctgcggcacgtctgtttgaagaa
gcgctgaagctgctgcaggccggccacggctaccagacctatctgcgcctgcgcgagtat
cagctgttccagccgctgttcccgatgatcacacgtaacttcaccgaacagggtgacagt
aatatggagcggatgatcctgcaggtgctgaaaaataccgatacccgcatcagtaaccag
atgcgtgtcaatccggcgttcctgtttgccgccatgttctggtatccgcagctggaagcg
gcgcagaaaattgcccaggagagcgggctggcttattacgacgcctttgcgctggcgatg
aacgacgtgctggatgaagcctgccgttctctggcgatcccgaaacgcattaccaccctg
gtgcgcgatatctggcagctacagctgcgcctgtcgcgccgccacggcaagcgcgcgtgg
aagctgatggagcatcctaagttccgcgccgcctatgacctgctggcgctgcgcgccgaa
gtggagaacaattcagagctgcaccgcctgaccacctggtggggcgagttccaggtctcc
gcgccgccgcagcagaaaaccatgctcaacacccttggtgacgatccggatccgcgccgc
cgtacccgccgcccgcgcaagcgcgcgccgcgccgtgactacagcagcaacgaatga
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