Erwinia sp. E602: GKQ23_20110
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Entry
GKQ23_20110 CDS
T10706
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
erwe Erwinia sp. E602
Brite
Transcription machinery [BR:
erwe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GKQ23_20110 (rapA)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QUG77159
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Position
4035813..4038719
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVAVDTRMVTVMFPATGENRLYSRNDSPITRVVFNPGDT
VTSHEGWQLIVDEVQTDNGVVSYFGTRTDTGETGVRLREVMLDSKLVFGKPQDRLFAGQL
DRMDRFALRFRARKYQSEQYRLPISGLRGMRTSLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERILIVVPETLQHQWLVEMLRRFNLRFALFDDDRYAEAQH
DSDNPFETEQMIICSLDFVRRNKQRLEKLADAEWDLMVVDEAHHLVWSEEAPSREYQVIE
QLAENIPGVLLLTATPEQLGLESHFARLRLLDPDRFHDFAAFVEEQKHFQPIADAVSMLL
ADKTISNDELNLLNDLMGEQDIEPLLQVANSDREGKLEARQELISMLMDRHGTSRVLFRN
TRGGVKGFPKRELHQIRLPLPTQYQTAIKVSGIMSARKSADERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLLGFLTSNRDKKVLVICAKAATALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAWFASEEDGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQIHVPYLERTAQAVLVQWFHEGLDAFEHTCPTGRTVYDSVYAQLIAYLAAPENS
EGLAEFIAGCRKQHDGLKAQLEQGRDRLLELNSNGGEKAQALAAQIAEQDNDIELVNFAL
NLFDIVGINQEDRSDNLIVLTPGDHMLVPDFPGLPEDGCTITFDRNQALSREDAQYVSWE
HPIIRNGLDLILSGDTGSCALSLLKNKALPAGTLLLELVWVVEAQAPKHLQLTRFLPPTP
VRMLVDRNGNNLAAKVEFESFNRQLNAINRHTGSKLVNAVQQDVHEIIKLSEEPAAVEAR
KLIDAARAEASDKLGAELSRLQALSAVNPNIRQDEIDALESNREQVLASLDDAGWRLDAL
RLIVVAHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggataagcgatacggaaagcgagctgggattagga
accgtggttgcggtggatacccgcatggtcacggtgatgttccctgccaccggtgaaaac
cgtctctactccagaaatgattcgccgatcacccgcgtggtgtttaacccgggcgatacc
gtcaccagccacgaaggctggcagctcatcgttgacgaagtacaaaccgacaacggcgtg
gtcagctatttcggcacccgcaccgacaccggcgagaccggggtacgcctgcgggaagtg
atgctcgacagcaagctggtgtttggcaagccgcaggatcgcctgttcgccggccagctt
gaccgcatggaccgttttgcgctgcgcttccgcgcgcgcaaatatcagagcgagcagtac
cgcctgccgatcagcggcctgcgcggcatgcgcaccagcctgatcccgcaccagctgcac
atcgcacacgacgttggccgccgccacgcgccgcgcgtgctgctggccgatgaagtgggt
ctgggtaaaaccattgaagccgggatgatcatccaccagcagctgctggccggccgcgcc
gagcgtattctgatcgtggtgccggaaaccctgcagcaccagtggctggttgagatgctg
cgccgcttcaacctgcgctttgcgctgtttgatgacgaccgctacgccgaagcgcagcac
gatagcgacaacccgtttgaaaccgagcagatgattatctgttcgctggacttcgtacgc
cgcaacaagcagcgcctggagaagctggccgacgccgagtgggacctgatggtggtcgat
gaagcccaccacctggtgtggtcggaagaggcaccgagccgcgagtatcaggtgattgaa
cagctggcggaaaatattcccggcgttctgctgctgaccgccaccccggaacagctgggt
ctggagagccactttgcccgcctgcgcctgctggatccggaccgcttccacgatttcgcg
gcctttgttgaagagcagaagcacttccagccgatcgccgacgcggtatcgatgctgctg
gccgataaaaccatcagcaacgacgagctgaacctgctgaacgacctgatgggcgagcag
gatatcgagccgctgctgcaggtggccaacagcgatcgtgaaggcaagctggaggcccgt
caggagctgatcagcatgctgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgcggcggcgtaaagggcttcccgaaacgcgaactgcaccagatccgcctgccgctg
ccgacccagtaccagaccgcgattaaggtctccggcatcatgagcgcccgcaaatctgcc
gacgagcgcgcgcgcgatatgctctatccggagcagatttatcaggaatttgaaggcgac
agcggcacctggtggaacttcgacccgcgcgttgagtggctgctcggcttcctgaccagc
aaccgcgacaagaaagtgctggtgatctgcgccaaggcggccaccgcgctgcagctggag
caggtgctgcgcgagcgcgaagcgatccgtgccgccgtgttccatgaagggctgtcgatt
atcgagcgtgaccgcgccgccgcgtggttcgcctctgaagaggacggtgcccaggtgctg
ctctgttcggagatcggctccgaaggccgcaacttccagttcgccagccagctggtgatg
ttcgacctgccgtttaacccggacctgctggagcagcgtatcggccgtctggaccgtatc
ggccagatgcacgatattcagatccacgtgccgtatctggaacgtaccgcgcaggcggtg
ctggtgcagtggttccacgaagggctggacgccttcgaacacacctgcccgaccggccgt
accgtctatgacagcgtctatgcacagctgatcgcgtacctcgccgcgccggaaaacagc
gaagggctggcagagtttatcgccggctgccgcaaacagcatgacgggttgaaggcgcag
ctggaacagggccgcgaccgtctgctggagctcaactccaacggcggcgagaaggcgcag
gcgctggccgcacagatcgccgaacaggataacgacatcgagctggtgaacttcgcgctc
aacctgttcgatatcgtcggcattaaccaggaagaccgcagcgataacctgatcgtgctg
acccccggcgaccatatgctggtgccggacttcccgggcctgccggaagatggctgcacc
atcaccttcgaccgtaaccaggcgctgtcgcgtgaagacgcgcagtacgtcagctgggag
cacccgatcatccgcaacggtctggatctgatcctctccggcgacaccggcagctgcgcg
ctgtcgctgctgaaaaacaaggcgctgccggccggcacgctgctgctggagctggtctgg
gtggtggaagcgcaggcgccgaagcacctgcagctgacccgcttcctgccgccaaccccg
gtgcgcatgctggtcgaccgtaacggcaataacctggcggccaaagtggagtttgaaagc
tttaaccgccagctgaacgccatcaaccgccacaccggcagcaagctggtcaacgcggtg
cagcaggacgtgcatgagattatcaagctgtccgaggagccggcggcggtggaagcgcgt
aagctgatcgatgccgcccgtgcggaagccagcgataagctgggtgcggagctttcccgc
ctgcaggcgctgagcgccgtcaacccgaacatccgtcaggatgagattgacgcgctggaa
agcaaccgcgagcaggtgctggccagcctggatgatgccggctggcgcctggatgcgctg
cgtcttatcgtggtcgctcaccagtaa
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