Erwinia sp. E602: GKQ23_22295
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Entry
GKQ23_22295 CDS
T10706
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
erwe Erwinia sp. E602
Pathway
erwe00071
Fatty acid degradation
erwe00280
Valine, leucine and isoleucine degradation
erwe00310
Lysine degradation
erwe00362
Benzoate degradation
erwe00380
Tryptophan metabolism
erwe00410
beta-Alanine metabolism
erwe00640
Propanoate metabolism
erwe00650
Butanoate metabolism
erwe00907
Pinene, camphor and geraniol degradation
erwe00930
Caprolactam degradation
erwe01100
Metabolic pathways
erwe01110
Biosynthesis of secondary metabolites
erwe01120
Microbial metabolism in diverse environments
erwe01200
Carbon metabolism
erwe01212
Fatty acid metabolism
Module
erwe_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GKQ23_22295 (fadB)
00650 Butanoate metabolism
GKQ23_22295 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GKQ23_22295 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GKQ23_22295 (fadB)
00310 Lysine degradation
GKQ23_22295 (fadB)
00380 Tryptophan metabolism
GKQ23_22295 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GKQ23_22295 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GKQ23_22295 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GKQ23_22295 (fadB)
00930 Caprolactam degradation
GKQ23_22295 (fadB)
Enzymes [BR:
erwe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GKQ23_22295 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GKQ23_22295 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GKQ23_22295 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GKQ23_22295 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QUG77545
LinkDB
All DBs
Position
4533747..4535933
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQGETLTLNWLADGIAELVFDAPGSVNKLDTRTVASLGEAIAVLEQQPALRGLLLRSA
KPAFIVGADITEFLSLFAAPAQKLTDWLGFANSIFNRLEDLPVPTVSAISGYALGGGCEC
VLATDYRIASADLRIGLPETRLGIMPGFGGSVRLPRLLGADGALEIIAAGKDVDAPQALK
IGLIDAIVAPEKLQTAAIALLNEAIDGRQAWREKRQCKLQPLKLSRIEAAMSFTTAKAMV
QQTAGKHYPAPLTAVKTIEAAAGMGREQALALETAAFVPLARSPEARALVGIFLNEQALK
AKARQLTRDVVVPQRAAVLGAGIMGGGIAWQSAWKGVPVLMKDISEKALALGMGEAAKLS
TKQLERGRIDGLKLASVIGAIQPTLNYAGFDRVDVVVEAVVENPKIKAAVLQETEAQLRP
DAILASNTSTIPISLLAGSLQRPENFCGMHFFNPVPRMPLVEVIRGSKTADRTIATVMAW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDRVMEKRFGWPMGPSWL
LDVVGIDTAHHAQQVMADGFPARMKKTDRDAIDVLFDAGRYGQKNQLGFWRWETDAKGKT
KKVADDGIDMLLQTVVASARSFSDEEIVSRMMIPMINEVVRCLEEGIIASVAEADMALVY
GLGFPPFRGGVFRYLDTLGSDRVVAEAEAFHALGPLYHIPQSLADKAASAASWYPQATPA
GDAILKTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacacttaccctcaactggctggcggacggcatcgccgagctg
gtttttgatgcccccggttcagtgaataagcttgatacccgcaccgttgccagcctcggc
gaggcgattgccgtgctggagcagcagccggcgctgcgcggcctgctgctgcgctcggcc
aaacccgcctttatcgtcggggccgacattaccgaatttctctcgctgttcgccgcaccg
gcgcaaaaactgaccgactggctgggcttcgccaacagcatcttcaaccgactggaagac
ctgccggtgccgaccgtctcggccatcagcggctatgcgctgggcggcggctgcgagtgc
gtgctggcgaccgactaccgtatcgccagcgccgacctgcgcatcggcctgccggaaacc
cggcttgggatcatgcccggctttggcggttcggtgcgcctgccccgtctgctgggtgcc
gacggcgcgctggagattatcgccgccggaaaagatgtcgatgcgccacaggcgctaaaa
atcgggctgatcgatgccatcgtcgcaccagagaagctgcagacggcggcaatcgcgcta
ctgaacgaagcgatcgacggcaggcaggcgtggcgtgaaaagcggcagtgtaaactgcag
ccgctgaaactgagcagaattgaggcggcgatgagctttaccaccgccaaagcgatggtg
cagcaaaccgccggtaaacactaccccgccccgcttaccgcggtgaaaaccattgaggct
gccgccggtatggggcgtgaacaggcgctggcgctggaaacggcggcgtttgtcccgctg
gcgcgttcaccagaggcccgtgcactggtaggcatcttccttaacgagcaggcgctgaaa
gctaaagcccgccagctgacccgtgacgtggtggtgccacaacgtgctgccgtgctcggt
gccggcattatggggggcggtatcgcctggcagtctgcctggaaaggcgtgccggtgctg
atgaaggacatcagtgagaaagcgctggcgctgggcatgggtgaagccgcgaagctgtcg
actaaacagctggagcgcggccgcatcgacggcctgaagctggccagcgtgatcggagcc
attcagccgacgctgaactacgccggtttcgaccgggtggacgtggtggtggaggcggtg
gtggagaacccgaaaatcaaagcggcggtgctgcaggagactgaggcacagctgcgcccg
gacgcgattctggcgtccaacacctccaccattcccatcagcctgctggccggttcactg
cagcgtccggaaaatttctgcggcatgcactttttcaatccggtaccgcgtatgccactg
gtggaggtgatccgcggcagtaaaaccgccgacaggaccatcgccaccgtgatggcgtgg
gccagccagatgggaaaaaccccgatcgtagtcaatgactgccccggcttcttcgtgaac
cgggtgctgttcccctactttgccgcattcagcctgctgctccgggacggagcggatttt
cgccagatcgaccgggtaatggaaaaacgcttcggctggccgatggggccgtcgtggctg
ctggacgtggtagggattgataccgcgcatcacgcccagcaggtgatggccgatggtttc
ccggctcgaatgaagaaaaccgatcgcgatgccatcgacgtgctgtttgatgccgggcgt
tacggccagaagaaccagctcggcttctggcgctgggaaaccgatgcaaagggtaaaacg
aaaaaggtcgctgacgacggaatcgatatgctgctgcaaacggtggtggcatctgcacga
tcctttagcgacgaggagatcgtcagccgcatgatgatcccgatgatcaacgaagtggtg
cgttgcctggaagaaggcatcatcgccagcgtggcagaagccgatatggcgctggtttac
gggctgggcttcccgccattccgtggtggcgtgttccgctatctggatacgctgggcagc
gaccgcgtggtggcagaggcagaagccttccacgcactgggtccgctgtatcacatcccg
cagagcctggccgacaaagccgccagtgccgcaagctggtacccacaggccaccccagcg
ggtgatgccattctgaaaacggcgtga
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