Erwinia sp. E602: GKQ23_22430
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Entry
GKQ23_22430 CDS
T10706
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
erwe Erwinia sp. E602
Pathway
erwe03420
Nucleotide excision repair
erwe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
erwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKQ23_22430 (uvrD)
03430 Mismatch repair
GKQ23_22430 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erwe03400
]
GKQ23_22430 (uvrD)
Enzymes [BR:
erwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKQ23_22430 (uvrD)
DNA repair and recombination proteins [BR:
erwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKQ23_22430 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GKQ23_22430 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
QUG77571
LinkDB
All DBs
Position
complement(4564447..4566609)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSVMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDASLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNILVDEFQDTNNIQYAWIRMLAGDT
GKVIIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTNNILKAANTLIANN
NGRLGKELWTDGSDGEPIAIYCAFNELDESRFVVNRIKVWMENGGALNDCAILYRSNAQS
RVLEEALLQTSLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVINTPTRGIGD
RTLDVVRQTARERQLTLWQSSRALLQEKALAGRAASALQRFTELVDALAVETSELPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARVENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHQRMG
TPVTKNDSGFTLGQRVQHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLEPL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagcctgaatgacaaacaacgcgacgcggtagccgcc
ccgcgcagtaacctgctggtactggccggtgccggcagcggtaaaacccgcgtactggtg
caccgcatcgcctggctgctgtcggttgagaactgctccccttactcggtgatggcggtg
accttcaccaacaaggcggcggcggagatgcgtcaccgtattgagcagctgatcggcacc
agccagggcggcatgtggatcggcaccttccacgggctggcgcaccgcctgctgcgggca
caccatctggacgccagcctgccgcaggacttccagatcctcgacagcgaagaccagctg
cgcctgcttaagcggctgatcaaagcgatgaaccttgatgagaagcagtggcccgcccgt
caggggatgtggtacatcaacggcaaaaaagacgaagggctgcggccgaagcacatcgaa
agctacggcaatccggtggaacagacctggctgcgtatctaccaggcctatcaggaagcc
tgcgatcgcgccggtctggtggactttgccgaactgctgctgcgcgcccacgagctgtgg
ctgaacaagccgcatattctcaaccactaccgtgagcgcttcagcaatattctggtggac
gaattccaggataccaacaacatccagtacgcgtggatccgcatgctggccggcgacacc
ggcaaggtgattatcgttggcgacgacgaccagtcgatctacggctggcgcggggcgcag
gtggagaacatccagcgcttcctcaacgatttcccgggggcggaaaccatccgtctcgag
cagaactaccgctcaaccaacaacattctgaaggccgcgaataccctgatcgccaacaac
aacggccgtctggggaaagagctgtggaccgacggcagcgacggcgaaccgattgccatc
tactgtgcctttaacgaactggacgaatcgcgctttgtggtcaaccgcatcaaggtgtgg
atggaaaacggcggtgcgctcaacgactgcgccattctctaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagaccagcctgccgtaccgcatttacggcggcatg
cgcttcttcgaacgccaggagattaaagacgcgctggcctacctgcggctgattgccaac
cgcaatgacgatgcggcgtttgaacgggtcattaacaccccgacgcgcggcatcggcgat
cgtacgctggacgtggtgcgccagaccgcccgcgaacgccagctgacgctgtggcaaagc
agccgcgcgctgctgcaggagaaggcgctggccgggcgggcggcgtcggcgctgcagcgc
tttaccgagctggttgacgcgctggcggtagagaccagcgaactgccgctgcacgtacag
accgaccgggtaatcaaagactccggcctgtggttaatgtacgagcaggagaagggtgag
aagggccaggcgcgggtggaaaaccttgaggagctggtcaacgccacgcggcagtacagc
tatcaggatgaagacgaagacctgatgccgctgcaggccttcctctcccacgccgcgctg
gaggccggtgaaggccaggccgacaagtggcaggacgccgtgcagctgatgacgctgcac
tcggcgaaagggctggagttcagccaggtgtttatcgtcggcatggaagagggaatgttc
cccagccagatgtcgctggacgaaggcggacggctggaagaggagcgccgtctggcgtac
gttggcgtcacccgcgcgatgcaaaagctgaccctgacctatgccgaaacccggcgactt
tatggtaaggaagtgtatcaccggccgtcgcgctttatcggcgaactgccggaagagtgc
gtggaggaggtgcgcctgcgcgccagcgtcagccgcccggttaaccatcagcggatgggc
acgccggtgacgaaaaacgacagcggattcacgctgggccagcgggtgcagcatgccaaa
ttcggcgaggggaccatcgttaatatggaaggcagcggtgaacacagccggctgcaggtc
gccttccaggggcagggcatcaaatggctggtcgccgcctacgccaggctcgaaccgctc
tga
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