Erwinia sorbitola: GN242_03865
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Entry
GN242_03865 CDS
T06366
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
erwi
Erwinia sorbitola
Pathway
erwi03410
Base excision repair
erwi03430
Mismatch repair
erwi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GN242_03865 (recJ)
03430 Mismatch repair
GN242_03865 (recJ)
03440 Homologous recombination
GN242_03865 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erwi03400
]
GN242_03865 (recJ)
DNA repair and recombination proteins [BR:
erwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GN242_03865 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GN242_03865 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GN242_03865 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
PEP-utilizers
DUF4180
Motif
Other DBs
NCBI-ProteinID:
QGU89618
UniProt:
A0A6I6EM38
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All DBs
Position
852311..854029
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AA seq
572 aa
AA seq
DB search
MNSKTELRRREATDTDALPADLHPLLRRLYARRGIRQASELERGAKNLHPFQSLSGIQAA
VEILQRALANNLCIMIVGDFDADGATSTALTVLALRSMGGQNVKYLVPNRFDDGYGLSPE
VVEQAAARGAQLIVTVDNGISSHAGVALAHEKGIPVVVTDHHLPGETLPDADAIVNPNLN
DCTFPSKSLAGVGVAFYLMLALRSQLRNCGVTTLPNLAELLDLVALGTVADVVPLDANNR
ILVWQGLSRIRAGKCRPGIRALLEIANRDARQLAASDLGFALGPRLNAAGRLDDMSVGVA
LLLSEDLGQARMLASELDALNQTRKEIEQGMQSEALALCDRLEASSEALPLGIAMYHPEW
HQGVVGILASRLKERFHRPVIAFAPAGDGTLKGSGRSIAGLHMRDALERLDTLNPGLIIK
FGGHAMAAGLSLEEANFDRFRQCFADLVGDWLDAESLQGVVWSDGELMAQELTLPTAELL
REAGPWGQAFPEPTFDGKFRLLQQKLVGERHLKVMIEPLGGGPLLDGIAFNIDTALWPDP
SVKQVELAYKLDVNEFRGNRNVQLIIDHLWAL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtaaaacagaactccgtcgccgtgaggcgacggacaccgacgctttacctgcc
gatcttcaccctctgctacgtcgtctctatgcccgtcgcggaatccgccaggccagtgag
ctggagcgcggcgcaaagaatctgcatcctttccagtcccttagcggtattcaggcggcg
gtggagattctgcaacgggcgctcgccaataatctttgcattatgattgtgggcgacttt
gacgccgacggtgccaccagtacggcgttgaccgtgctggcgctgcgcagcatgggcggg
cagaacgttaagtatctggtgcctaaccgttttgatgatggctacggcctcagcccggaa
gtggtggagcaggcggcggcgcgcggcgcgcagctgatcgtcaccgtggataacggtatc
tcctcccatgcaggagttgctctggcccatgaaaagggcattccggtggtagtgaccgat
caccacctgccgggcgagacgcttccggatgccgatgccattgttaacccgaatcttaac
gactgcacattcccctccaaatcgctggcgggcgttggtgtcgcgttttatctgatgctg
gcgctgcgatcgcagctgcgtaattgcggtgtgaccaccctgccgaatctggctgaactg
ctggatctggtggcgctgggtaccgttgcagacgtcgtaccgctggatgccaacaaccgt
attctggtctggcagggactgagccgcattcgcgccgggaaatgccgtcccggtattcgt
gctctgctggaaattgccaaccgtgatgctcgtcagctggccgccagcgacttaggtttt
gccctcgggccgcgcctgaatgccgccggaaggctggatgatatgtcggttggcgtggcg
ctgctgctcagtgaggatctgggccaggcgcgcatgctcgccagcgagctggatgcgctt
aatcagacgcgcaaagagatcgagcaggggatgcagtcggaggcgctggcactgtgcgac
cgtcttgaggccagcagcgaagcgctgccgctcggcattgccatgtatcatccggagtgg
catcagggcgtggtgggtattctggcttcacgcctgaaagagcgcttccaccgcccggtg
attgcctttgcaccagcaggtgatggcacgctgaaaggctccggacgttcaattgccggg
ctgcatatgcgcgatgcactggagcggctggatactctcaatcccgggctgatcatcaaa
tttggcggtcatgcaatggcggccgggttatcgctggaagaggctaactttgaccgtttc
cgtcagtgctttgccgaccttgtgggcgactggcttgatgccgaatcccttcagggagtg
gtctggtcagacggcgagctgatggcgcaggagctgacgctgcccaccgctgaactgctg
cgtgaagcagggccatggggccaggcgttcccggaaccgacctttgacgggaagttcagg
ctgcttcagcagaagctggtgggcgagcgtcacctgaaagtgatgattgaaccgcttggc
ggtgggccactgctcgacggtatcgcttttaacatcgatacggcgctctggccggatccg
agcgtaaaacaggtggagctggcctataagctcgacgtcaatgagtttcgcggtaaccgc
aacgtgcagctaatcatcgaccacctctgggcgttgtaa
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