Erwinia sorbitola: GN242_04070
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Entry
GN242_04070 CDS
T06366
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
erwi
Erwinia sorbitola
Pathway
erwi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GN242_04070 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erwi03400
]
GN242_04070 (recD)
Enzymes [BR:
erwi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GN242_04070 (recD)
DNA repair and recombination proteins [BR:
erwi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GN242_04070 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Viral_helicase1
UvrD_C_2
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
UvrD_C
PhoH
T2SSE
AAA_16
DEAD
AAA_28
TrwB_AAD_bind
SRP54
DUF87
FtsK_SpoIIIE
MukB
AAA
NTPase_1
CbiA
Motif
Other DBs
NCBI-ProteinID:
QGU86450
UniProt:
A0A6I6EXE3
LinkDB
All DBs
Position
912222..914060
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AA seq
612 aa
AA seq
DB search
MTLTEGLQQAQRLRLLRPLDVQFAQMVASAEQPALMLAAALVSRDAGEGHVCLPLDQLYP
EAFFAGRHTDLAQALWQAAGAPQDWADYLLAQSAVGDGKSATPLVLHQQRLYLHRMWQSE
GEVAQFVQRQQHSVALDEVQMRQTLDRYFGQQPDDWQKIAAAVALTRQVAVISGGPGTGK
TTTVAKLLASLIELSATSPRIELAAPTGKAAARLTESLGKTLQELKLDDAIRNSFPGEAT
TLHRLLGALPGSQRMRYHRGNPLHLDVLVVDEASMVDLPMLANLIAALPAQARVIFLGDR
DQLASVEAGAVLGDICRCAESGYSMERAAELTRLTGCDVSGREDASASEVRDIICLLRKS
YRFTESSGIGQLAQAVNAGEVKRVEQVFSGGFSDIRRQTLSSSEDYQQLLDECVAGYRGY
LQRLSSGAEPAEVLAEFGRFQLLCALREGPFGVSGLNDRIEQSLRQAGLIRRNIAVNGKW
FVGRPVMIARNDRALGLFNGDIGIAMLDEEQQLKVFFPLPDGSIKAVQPSRLPPHDSAWA
MTVHKSQGSEFDHTLMVLPNQVLPVLTRELVYTAITRAKRQLTLYADKAVFNSAVKMRTQ
RRSGLVDRLTQV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgacagaaggtttacagcaggcgcagcgtctgcggctgctgcgtccgctcgac
gttcagtttgctcagatggtggcgagcgcggagcaacccgcgctgatgctggctgctgcg
ctggtgagccgcgacgccggggaaggtcacgtctgcctgcctctcgaccagttatatcct
gaggctttttttgccgggcgacataccgacctggcgcaggcgttatggcaggctgccggg
gcaccgcaggactgggctgattatttactggcgcaaagtgcggtcggtgacggaaagtca
gccacaccgctggtgctgcatcagcagcgcctctatctgcaccggatgtggcagagcgaa
ggggaagtggcgcaatttgttcagcgtcagcagcactctgtggcgctggatgaggtgcag
atgcgtcagacgctggatcgttatttcgggcagcagccggacgattggcagaagatcgcc
gccgcagtggcgctcacccgccaggttgcggtgatttccggcgggccgggtaccggcaag
accaccacggtggcgaaactgcttgccagcctgattgagctgtcggcgacgtcaccacga
attgagctggcggctccaaccgggaaagcggcggcaagactgacggaatcgctgggtaaa
acgctacaggaactgaagctggatgacgctatccgcaacagttttcccggtgaggcaacg
acgctgcaccgcctgttgggcgcgctaccgggcagccagcgcatgcgttatcaccggggg
aatccgctgcatcttgacgtgctggtggtggatgaagcttcaatggtggatctgccgatg
ctggctaacctgatcgccgcgttgcctgcacaggcgcgagtcatcttccttggtgaccgc
gatcagctcgcctcggtggaagctggtgccgtactgggggatatttgccgctgtgccgaa
tccggttacagcatggagcgtgccgctgaactgacgcgcctcacgggctgcgatgtatcc
ggacgtgaggatgccagcgcttcggaggttcgcgatataatctgcctgctgcgtaaaagc
tatcgattcaccgaatcatcaggaattggtcagcttgcacaggcagtcaacgccggagag
gtgaagcgggtagagcaggtattcagcggtggttttagtgatatccgtcgtcagacttta
agcagcagcgaggattatcagcagctgctggatgagtgtgtggctggttatcgcggctat
ctgcaacgcctgtcatcaggcgcggagcctgctgaggttctggcagagtttggccgtttc
cagctgctgtgtgctctgcgcgaagggccgtttggcgtatcagggctgaatgaccgtatt
gagcagtcgctgcgtcaggcggggcttatccgtcgcaatattgccgtaaatggcaaatgg
tttgtcgggcggccagtgatgatcgcccgcaacgatcgtgcgttggggctgtttaacggc
gatatcggcattgcgatgctggacgaagagcagcagctcaaggtgttcttcccattgcct
gatggcagcatcaaagctgtgcagccgagccgcctgccgccgcatgatagcgcctgggcg
atgacggtgcataagtctcagggctctgagtttgatcatacgctgatggtgttgccaaat
caggtgttgccggtgctgacgcgtgaactggtgtataccgccatcacccgcgctaaacgg
cagctgacgttatatgcagataaagcagtgtttaacagcgccgtgaagatgcgtacgcag
aggcgtagcggcctggtggatcggttaacgcaggtgtag
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