Erwinia sp. LJJL01: ACLI4M_10535
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Entry
ACLI4M_10535 CDS
T11594
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
erwl Erwinia sp. LJJL01
Pathway
erwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLI4M_10535 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erwl03021
]
ACLI4M_10535 (rho)
03019 Messenger RNA biogenesis [BR:
erwl03019
]
ACLI4M_10535 (rho)
Transcription machinery [BR:
erwl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACLI4M_10535 (rho)
Messenger RNA biogenesis [BR:
erwl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACLI4M_10535 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XNP16850
LinkDB
All DBs
Position
2094346..2095605
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARLRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDSISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccggtttcagacctgattaccctcggcgaaaat
atggggctggaaaacctggcgcgcttgcgcaaacaggacatcattttcgccatcctcaag
cagcatgctaaaagtggcgaagacatcttcggcgatggcgtactcgagatattgcaggat
ggatttggtttcctccgctctggagacagttcctacctcgccggtcccgatgatatctac
gtttcccctagtcaaatccgccgctttaacctccgcactggtgactccatctctggcaag
atccgtccgccaaaagagggtgagcgttactttgcgctgctgaaagttaacgaagttaac
tacgacaaaccggaaaatgcccgtaacaaaatcctgtttgagaacttaacgccgctgcat
gctaactcacgtctgcgcatggagcgtggtaacggctccaccgaagatttgaccgctcgc
gtactggatctggcttcgccgatcggtcgtggccagcgtggtctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcagaacattgcgcagagcatcgcctacaaccatcca
gactgcgtgctgatggtgctgctgattgacgaacgtccggaagaagttaccgagatgcag
cgtctggttaaaggtgaagtgatcgcttctacctttgacgaaccggcatcacgccacgtt
caggttgctgagatggtgatcgagaaggccaagcgcctggtcgaacacaaaaaagacgtg
atcatcctgctcgactccattacccgtctggcgcgtgcctataacaccgtggttcctgct
tctggcaaggtactgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgctgcgcgtaacgtggaagagggtggaagcctgaccatcatcgccaccgcactg
gttgataccggttcgaagatggatgaagtgatctacgaagaatttaaaggtaccggcaac
atggaactgcatctggcgcgtaaaatcgctgagaagcgcgtgttccctgctatcgattac
aaccgttcaggtacccgtaaagaagagttgctgaccacgtcagaagagctgcagaaaatg
tggatcctgcgcaagattattcacccaatgggcgaaatcgacgcaatggagttcctcatc
aacaagctggcgatgacgaaaaccaacgatgaattcttcgatatgatgaagcgttcataa
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