Enterococcus rotai: ATZ35_06045
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Entry
ATZ35_06045 CDS
T10457
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
erx Enterococcus rotai
Pathway
erx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATZ35_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erx03019
]
ATZ35_06045
Messenger RNA biogenesis [BR:
erx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ATZ35_06045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALS36730
UniProt:
A0A0U2WXG4
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All DBs
Position
1309846..1311402
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AA seq
518 aa
AA seq
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MVLGILLAIIGLVVGLGLGLVVAKSRHEKAIDGAKSSAEGIIESANKEAETLKKEALLKA
MEENQKYRSEIESELKESKVELKSQENRLLQREQTLDRKDDSLEKRENSLEEKEEKLGAR
QQLIDEREKDVEELVEKQHQEIERIASLSKDEAKDIIMKSTEEELSHELTVMVKESEQRA
KEESDRKAKNLLSLAIQRCAADSVSETTVSVVSLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREY
GEQAAFEVGAHTLHPDLIKILGRLRFRTSYGQNVLNHSIEVAKLTGVLAAEIGEDIQLAK
RAGLLHDIGKALDHEIEGSHVEIGAELAAKYKENSTVINAIASHHGDVEATSVISVLVAA
ADALSAARPGARSESMENYIRRLENLENISNGFEGVESSFAVQAGREVRVMVKPDEITDL
EAVRLVRDIRKKIEDDLDYPGHIKVTVIRETRAVDYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggttttaggaattctcctcgctatcatcggtttagttgtcggtcttggtttagggtta
gtcgttgcaaaatcacgtcatgaaaaggctatagatggtgcaaagtcctctgcagaaggc
ataatcgaaagtgcgaataaagaagcagagactctgaaaaaagaagctttattaaaagct
atggaagaaaaccagaagtatcgttcagaaattgaaagtgagttgaaagaaagcaaagta
gaacttaaatctcaagaaaatcgtttactacaaagagaacaaacattagatcgtaaagat
gactctcttgaaaaacgtgaaaactcactggaagaaaaagaagagaaacttggtgctaga
cagcaattaattgatgagcgagaaaaagatgtagaagaactagttgaaaagcaacaccaa
gaaatagaacgtattgcttcactatctaaagacgaagcaaaagatattatcatgaaatca
acagaagaagaactaagtcatgagttaaccgtaatggtcaaggaatctgaacaacgtgca
aaagaagaatcagatagaaaagcgaaaaatttactttccttagcgatccaacgttgtgcg
gcggattcagtttctgaaacaactgtttctgttgttagcttaccaaatgatgagatgaaa
ggaagaatcatcggccgtgaaggacgtaacattcgtacattagagaccttaacaggaatc
gatttgattattgatgatacgccggaagctgtggtactttcaggattcgacccaattcgt
agagaaattgctcgtatgacactagaaaaattgattcaagatggccggattcatccagcc
cgtattgaagaaatggttgaaaagtctcgtaaggagatggacgaacgaatccgtgaatac
ggagagcaagcagcttttgaagttggtgctcatacgttacatccagatttgatcaagatt
ttaggtcgattgcgtttccgtacaagttatggtcaaaacgtattgaatcactcaatcgaa
gtggctaaattaactggtgtcttggccgcggaaataggcgaagatatccaattagcaaaa
cgtgcaggtttactacatgatattggtaaagcattggatcatgagattgaaggatctcac
gtcgaaatcggtgctgaattagctgctaaatacaaagaaaattcaacagttattaatgcg
attgcatcgcatcatggcgatgtagaagcgacttctgttatttcagtcttagtagcagca
gcggatgctttatctgctgctagacctggcgctcgtagcgaatcaatggaaaactacatt
cgccgcttagaaaacttagaaaatatttctaatggatttgaaggcgttgaatctagcttc
gctgtacaagcaggacgtgaagttcgcgtcatggtcaaaccagatgaaatcacagattta
gaagctgttcgtttagtaagagatattcgtaagaaaatcgaagacgacttggattaccca
ggacacatcaaagtgactgttatccgggaaacacgtgcagtcgattacgccaaataa
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