Enterococcus rotai: ATZ35_14635
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Entry
ATZ35_14635 CDS
T10457
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
erx Enterococcus rotai
Pathway
erx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATZ35_14635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erx03400
]
ATZ35_14635
Enzymes [BR:
erx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ATZ35_14635
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ATZ35_14635
DNA repair and recombination proteins [BR:
erx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ATZ35_14635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Auto_anti-p27
DZR
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ALS38336
UniProt:
A0A0U2XDT6
LinkDB
All DBs
Position
complement(3303246..3304082)
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AA seq
278 aa
AA seq
DB search
MPELPEVETVRKGLEKLVVGKTIEEVTILWPRIIESPETDIFAQQLIGQTIEKMERRGKF
LIFKLTNYDMISHLRMEGKYETHKPEEERTKHTHVIFTFTDGTELRYLDVRKFGRMVLVP
KNQGEQYKGILALGPEPIPTQFKLKEFRMGLKKHHKAIKPLLLDQRLVTGLGNIYVDEAL
WEASIHPEQPADSLKPKEVEGLYYAIIDVLGRAVEAGGTTIRSYLNALGEAGTFQISLNV
YGQTEKPCPRCATPIKKIKVAQRGTHFCPKCQTLKVRN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccgtcagaaaagggttggaaaagttagttgtcggc
aaaacaatcgaagaagtcacgatattatggccgagaatcattgaatcacctgaaacagat
atttttgcgcaacagttgattggtcaaacaatcgaaaaaatggaacgacgtgggaaattt
ttgattttcaaattaacgaattacgatatgatttctcatctgcggatggaaggaaagtat
gaaacccataagccggaagaagagcgaacaaaacacacccatgtgatttttacatttacc
gatggaactgaactccgttatcttgatgttcggaaatttggtcgtatggttttagtgcct
aaaaatcaaggtgaacagtataaaggtatcttggctttaggtcctgaaccgattcctact
caattcaaattaaaggaatttcgaatggggttaaaaaaacatcataaagccatcaaaccg
ttattattagatcaacgactagttaccggtttagggaatatttatgtagatgaggctttg
tgggaagcgagtattcatccagaacaacccgctgattcattaaaacctaaagaggttgaa
gggctgtattatgcaatcatcgatgtcctaggccgagcggtcgaagctggcggaacaaca
atccgtagctacttaaatgcgctaggcgaagcaggaaccttccaaatttcactaaatgtt
tatggccaaacggagaaaccatgtccacgatgtgctacaccaatcaaaaaaatcaaagtt
gcacaacgaggaacccatttttgtccgaagtgtcaaaccttaaaagtgagaaactaa
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