Aurantiacibacter atlanticus: CP97_01000
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Entry
CP97_01000 CDS
T03997
Name
(GenBank) type IIA topoisomerase B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ery
Aurantiacibacter atlanticus
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ery03032
]
CP97_01000
03400 DNA repair and recombination proteins [BR:
ery03400
]
CP97_01000
Enzymes [BR:
ery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP97_01000
DNA replication proteins [BR:
ery03032
]
Prokaryotic type
DNA Topoisomerases
CP97_01000
DNA repair and recombination proteins [BR:
ery03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP97_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKQ43029
UniProt:
A0A0H4VJ83
LinkDB
All DBs
Position
191377..193923
Genome browser
AA seq
848 aa
AA seq
DB search
MENTPDQTAGPTPEKPRQNGEYGAESIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
SDNAIDEALAGHCDLVLIELNADGSVSVEDNGRGIPVGIHKEEGVSAAEVIMTQLHAGGK
FENTSEDNAYKVSGGLHGVGVSVVNALSQWLELRVWREGKEHWMRFEHGDAVASLEVTGD
APPVASNGDQDGLKKGTRVTFLPSTDTFKNVTEFDFEKLEHRYRELAFLNSGVRILLRDL
RHEEVAEHDLFYEGGIAAFVKWLDRNKAPLVPDPISVSAEKDSIGIDVALEWNDSYYENV
LCFTNNIPQRDGGTHLAAFRAALTRTLNNYATSSGLLKNAKVSLSGEDMREGLTAIVSVK
LPDPKFGSQTKDKLVSSEVRQPLESLMGEKMTEWLEENPADAKSIIQKIIDAAAAREAAR
KAREMSRKGAMSVASLPGKLSDCRERDPAKSEIFLVEGDSAGGSAKSGRDSKYQAILPLK
GKILNVERARFDRIISSKEVGTLIQAMGTGLRDEFNLEKLRYHKIVIMTDADVDGAHIRT
LLLTFFHRQMPEIIKAGHLFIAQPPLFKVAKGKSEVYLKDQGALDRYLVENGLQDRVLET
AGGARSGADLADLVEKALLLKNLLAFAPRKYDAAVIEAMAMAGALEPDLDTTARNERLSH
AAGQIQLSDSEADWSATMTETGDVRFDRVWRGVTDVHLIEGKFLDSAEARKLHVRGVEQA
ETYASPARLVKAGSAQQASDTATDEDGAGDLPATGLNGAITRPSQLLDAVLTAGRKGLSI
SRYKGLGEMNAEQLWETTLDPENRELLQVKVEDADVTDEIFTRLMGDVVEPRREFIQDNA
LNVANLDV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacccccgaccaaacagccggccctacccctgaaaaaccgcgccagaacggc
gaatatggcgctgaaagcatcaaggtgctgaaggggctggatgccgtgcgcaaacggccc
ggcatgtatatcggcgatactgatgacggttcgggcctgcaccacatggtctttgaagtg
agcgacaatgcaattgacgaagctctggcaggccattgcgaccttgttctgatagaactg
aacgccgatggctctgtcagcgtggaagataatggccgcggcattccggtgggcatccac
aaggaagaaggcgtatccgccgccgaagtcatcatgacccagcttcatgcgggcggcaaa
ttcgaaaacacctcggaagacaatgcctataaggtttccggcgggcttcacggcgtcggc
gtcagcgtggtcaatgcgctgtcgcaatggctggagctgcgcgtctggcgcgaaggcaag
gaacactggatgcggttcgagcatggcgatgctgtcgcctcgctcgaagtgacgggcgat
gccccgccggttgcttcaaacggcgatcaagacgggctcaagaagggcacacgcgtcact
ttcctcccttcaaccgatacgttcaagaatgtcacggaattcgatttcgagaagctggaa
catcgctatcgtgagctggccttcctcaattcgggcgtgcgcattctgctgcgcgatctg
cgccatgaggaggtggcagaacatgatctgttctacgaaggcggcattgcggccttcgtc
aaatggctcgatcgtaacaaggctccgctggtgcccgatcccatttctgtcagcgcggaa
aaggacagcatcggcatcgatgtggcgctggagtggaatgattcctactatgaaaatgta
ctgtgcttcaccaataatattccgcagcgcgacggcggcacgcatctcgccgctttccgc
gcggcacttacccgcacgcttaataattatgcgacatcatcgggccttctgaagaatgcc
aaggtctcgctttcgggtgaggatatgcgcgaagggctgaccgcgatcgtctcggtcaag
ctgcccgatcccaaattcggcagccagaccaaggacaagcttgtcagttcagaagtgcgc
cagccgcttgaaagcctgatgggcgagaaaatgaccgagtggctggaagaaaatccggcc
gatgcgaagtccatcatccagaagatcatcgacgctgctgccgcccgggaagcggcacgc
aaggcccgcgagatgagccgcaagggcgctatgagtgtcgccagcctgccgggcaaattg
tccgattgccgcgagcgtgatcctgccaagtccgaaattttcctggtcgagggcgattcc
gccggtggctctgccaagagcgggcgcgattccaaatatcaggcgatcctgcccctaaag
ggcaagatcctcaatgttgaacgcgcgcgcttcgatcgcatcatcagttccaaggaagtg
ggcacgctgatccaggcgatgggcactggtctgcgcgacgaattcaatctggaaaagctg
cgctatcacaagatcgtcatcatgaccgacgccgatgtcgatggtgcgcatatccgcacg
ctgctgctgaccttcttccaccgccagatgcccgaaatcatcaaggcaggccatctgttc
atcgctcagccgccgctgttcaaggtcgccaagggcaagagcgaggtttacctgaaagat
cagggcgcgctggatcgctatctggtggaaaacggattgcaggaccgcgtgctggaaacc
gcaggcggtgcgcgttcgggcgccgatctggcggatttggtcgaaaaggcgctgctgctc
aagaacctgctcgcctttgcgccgcgcaaatatgatgccgcagtgatagaggcgatggcc
atggcaggcgcactggagccggatcttgatacgaccgcgcgcaatgaacggttgagccat
gccgcaggacagatccagctcagcgatagcgaggcagactggtccgcgacaatgacagag
acaggcgatgtgcgctttgaccgcgtatggcgcggcgtgaccgatgtgcacttgatcgaa
ggtaaattcctcgacagtgcagaggcgcgcaagctgcatgtgcgcggcgttgaacaggcc
gaaacctatgccagcccggcgcggctggtaaaggcaggcagcgcccagcaggcgagcgat
actgccactgatgaagatggcgcaggcgatcttcccgcgactggcctgaatggcgcaatc
acacggcccagccaattgctcgatgcggtgctgactgcgggacgcaagggtctttctatc
agccgctacaagggccttggcgaaatgaatgccgagcagctttgggaaaccacgctcgat
ccggaaaaccgtgagctgctgcaagtgaaggtggaagatgccgacgtcaccgacgaaatc
tttacccgcctgatgggtgacgtggtcgaaccacgccgcgagttcattcaggacaatgcg
ctcaacgtcgccaatctggacgtctga
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