Aurantiacibacter atlanticus: CP97_01210
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Entry
CP97_01210 CDS
T03997
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ery
Aurantiacibacter atlanticus
Pathway
ery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP97_01210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ery03019
]
CP97_01210
03400 DNA repair and recombination proteins [BR:
ery03400
]
CP97_01210
Enzymes [BR:
ery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP97_01210
Messenger RNA biogenesis [BR:
ery03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP97_01210
DNA repair and recombination proteins [BR:
ery03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP97_01210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKQ40964
UniProt:
A0A0H4VCY3
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All DBs
Position
complement(239958..241754)
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AA seq
598 aa
AA seq
DB search
MQPSLSSPADLAQARSELRRIFGFDSFRGVQEDVLARVLAGQSTLAVMPTGAGKSLTYQL
PATMLEGTCVVISPLIALMHDQLRSARANGIAAATLTSVDSDWRETQDAFRRGELDLLYV
APERASQAGFRDMLSSARVGLIAVDEAHCVSEWGHDFRPDYRQLRGLLDALPHVPRLALT
ATADAHTRADILSQLGIPADGLVLAGFDRPNICYTITQRDNLARQITDLMASEPGPGIVY
APTRAKVEKLSEQLADATGRPVLPYHAGLDAQVRRDNQAAFVASEDMVIVATVAFGMGID
KPDVRFVAHAGIPKSIEGYYQETGRAGRDGDPARAVMLWGAGDFATARQRLSDVEQHRLA
GERARLDALAGLVETPTCRRAVLLRHFGENPPVSCGNCDNCLAPPKVTDVTELARKLLSA
AYRTGQSFGLGHLANVLTGSADDRVRQKGHDKLSVFGIVEGDQAALLRPLARAMQARGAL
VSNAHGGLELGGDARAILTGEQNVEIVLPPKKQGRGRRNGGVALNPVGDRLFDALRNLRR
DLAAEAGVPPYVVFHDAVLRDLASRRPSSLAAMSGIAGVGEKKLAAFGDAFLKAIREN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatcactctcctctcccgccgatcttgcgcaggcgcgcagcgaattgcgccgc
attttcgggttcgattcctttcggggcgtgcaggaagatgtgctggcgcgggttctggcg
ggccaatcgacgctggcggtaatgccgacaggtgcgggcaaatcgctcacctatcaattg
cccgccaccatgctggagggcacctgcgtcgtcatatctccgctgattgcactgatgcac
gatcagttgcgcagtgcgcgggccaatggaattgccgctgccacgctaaccagcgttgat
agcgattggcgcgaaacgcaggatgcctttcgccggggtgagctggatttgctctatgtt
gcgccggaaagggcaagccaggccggatttcgcgatatgctttcctcggcaagggtgggg
ctgattgcggtggatgaggcgcattgcgtttcggagtgggggcatgatttccgccctgat
tatcgccagttgcgcggattgctcgatgcccttccacacgtcccgcgtcttgcgctaacc
gccactgcagatgcacatacccgcgccgatatcctcagccagctcggtattccggcagat
gggctggtgctggcaggctttgatcgtcccaacatctgctacaccatcacccaacgcgac
aatctggcgcgccagatcaccgatctgatggcaagcgagccggggccgggcatcgtctat
gcgccgacgcgggcgaaggtcgaaaagctcagcgaacaactcgccgatgcaacaggacgg
cctgtccttccctatcacgcggggcttgatgcgcaggtacggcgcgataatcaggcagcc
ttcgtggcctctgaagacatggtcatcgtggcgacagtcgccttcggcatggggatcgac
aaacccgatgtgcgctttgtggcgcatgcgggcatccccaaatcgatcgaaggatattat
caggaaaccgggcgcgcagggcgcgatggtgatccggcgcgcgcagtcatgttgtggggt
gctggcgattttgccacagcacgtcagcgtctgtccgacgtggagcaacaccgccttgca
ggagagcgcgcacggctcgatgcgctggccgggctggtggaaacgccgacctgccgccgc
gcagtgctgctgcgccatttcggggaaaatccacctgtcagctgcggcaattgcgataat
tgtcttgccccacccaaagtcaccgatgtcaccgaactggcacgcaaactgctcagcgct
gcctatcgcaccggccaaagcttcggccttggccatcttgccaatgtgctgacaggcagc
gcggacgatcgggtgcgccagaaggggcatgacaagctgtcggtcttcggtatcgttgaa
ggcgatcaggctgctctcctgcgcccgctggcaagggcgatgcaggcgcgcggagcgctt
gtctccaatgcccatggcgggctggaactgggtggggatgcccgcgctatactcacaggt
gagcaaaacgtggaaatcgtcctgccgccaaaaaagcagggccgtggccgccgcaatggc
ggggtcgcgctcaaccccgtgggcgatcggttgttcgatgccttgcgcaatttgcgccgc
gatctggcagcggaggcaggcgtgccgccctatgtcgtgtttcacgatgcagtgttgcgc
gacctggcatcacgccgtccttcatcgttggctgccatgtcgggcatcgccggcgtgggc
gagaaaaagctcgccgcttttggtgatgcattcctcaaggctatccgcgaaaactga
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