Aurantiacibacter atlanticus: CP97_02125
Help
Entry
CP97_02125 CDS
T03997
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ery
Aurantiacibacter atlanticus
Pathway
ery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP97_02125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ery03021
]
CP97_02125
03019 Messenger RNA biogenesis [BR:
ery03019
]
CP97_02125
Transcription machinery [BR:
ery03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CP97_02125
Messenger RNA biogenesis [BR:
ery03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP97_02125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
ATPase_2
AAA_22
NACHT
AAA_25
S1CSD-TOTE-2
AAA
Fungal_virus_P2_C
GpA_ATPase
AAA_14
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AKQ41101
UniProt:
A0A0H4VE20
LinkDB
All DBs
Position
428587..429843
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKELKQRAPAELVSMAEEMGVEGASTMRRQDLMFAILKEVAEDGEEILGIGTIEVLQD
GFGFLRSPEANYLAGPDDIYVSPNQVRKMGLRTGDTVEGEIRAPRDGERYFALTKLKQVN
FEDPEAVRHRTNFDNLTPLYPDSRLNLDTKDPTVKDKSARVIDLISPQGKGQRALIVAPP
RTGKTVLLQNMAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVKGEVISSTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVDKEQLSKMWVLRRILMQMGTIDSMEFLLDKMKDSKTNEDFFATMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgaaagaactgaaacagcgcgcgccggcagaactggtctccatggcggaggaa
atgggtgtcgaaggggcatcaaccatgcgccgccaggatttgatgttcgccatcctgaag
gaagttgctgaagacggggaagaaattctcggcattggcacgattgaggttttgcaggac
ggttttggtttcctgcgttcgcccgaagcaaattaccttgccggaccggacgatatttat
gtctctcctaatcaggtccgcaagatgggcctgcgcacgggcgataccgtcgaaggtgaa
atccgcgctccgcgcgatggcgaacgctatttcgcactgaccaagctcaagcaggtcaat
ttcgaagaccctgaggctgtgcgccaccgtaccaatttcgataatctgacaccgctctat
cccgactcgcgattgaatctcgatacgaaggatccgacggtcaaggacaagtcggctcgc
gtcattgatctcatcagcccgcaaggtaagggccagcgtgctctgatcgttgctccgcca
cgtacaggtaaaaccgttctcttgcagaacatggccaaggccatcactgataatcacccc
gaggtgttcctgctggttctgctcgtggatgaacgccctgaggaagtcaccgatatgcag
cgcagcgtgaagggcgaggtcattagctctaccttcgatgaacccgcttcgcgccacgtc
caagttgctgaaatggttatagaaaaagcaaaacgcctggtcgaacacaagaaggatgtg
gtcatccttctcgattccatcacgcgccttggccgggcctataacaccgttgtgccaagc
tccggcaaggtgctgaccggcggtgtcgatgccaatgccttgcagcgtccgaagcgcttt
ttcggcgcggcccggaatattgaagagggcggttcgctttccatcatcgctactgcgctg
atcgatacgggcagccgcatggacgaagtgatctttgaagagttcaagggcaccggcaac
agtgaaatcgtgcttgaccgcaaggttgcagacaagcgtatcttccccgctcttgatgtc
ggcaagtccggcacccgcaaggaagaattgctggtggacaaggaacagcttagcaagatg
tgggtcctgcgccggatcctgatgcagatgggcaccatagattcgatggaattcctgctc
gacaagatgaaggattccaagaccaatgaagatttctttgcgacgatgaaccagtag
DBGET
integrated database retrieval system
