Aurantiacibacter atlanticus: CP97_08495
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Entry
CP97_08495 CDS
T03997
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
ery
Aurantiacibacter atlanticus
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ery03019
]
CP97_08495
Enzymes [BR:
ery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CP97_08495
Messenger RNA biogenesis [BR:
ery03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CP97_08495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
Flavi_DEAD
HA2_N
Cas3-like_C_2
AAA_30
ResIII
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKQ42051
UniProt:
A0A0H4VGT1
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All DBs
Position
1730853..1733300
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AA seq
815 aa
AA seq
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MRFVGLAETMTDLPINAVLPELLTALSDGNGAVLVAPPGAGKTTSVAPALLDEKWCSGQI
ILTSPRRVAARAAAERIAQMLGEPVGQQVGYLTRLDSKTSKATRIFVVTEAILINRLLED
QELAGVSALLFDEAHERHLDSDLGLALALETQTVLREDLRIVVMSATIDGARFARLMGEP
TKVIESAGIAYPLNLRWLGSAAERRLEDQMTSAVLTAWREQEGDILVFLPGVGEIERVRE
RLAQKLPDTPILPLHGQIQPENQRAAIRRDPDGHRRIVLATSIAETSLTLDGVSVVVDSG
LARRAEFDRAAGTSHLVTQRSSQAAAAQRAGRAVRQGPGVAYRLWEEAGHAGRPTFDVPE
MLSADLAPLILSLARWGVTDPASLQWLDTPPDASVASARARLAALGALDDDGAITPWGEK
IASLSLDPEGAAAVLLAAQHGQAEDVARLVLLTQERGLGGRGEDLLQRLSRWNGDRRARA
QASRKLASSWVKAADRLVTGKPDKPLDPAIFIALARPDFVARRRDASGEHWISAGGRGFA
LDPASPLARAEWLVIADATGQAKGARITAAALLDRADIERHLDHLIEYRTIARWNESENR
VEARRQRRLGAITLASGPDPVPDGRVLVDILVEKAGEKLGELLPPSLIARARFAGLDSLS
EVRLRESAEAWLAPLLDGRRDLSLPASHYAEAALGLLAWEDRQQLDSLAPRHFTSPAGTT
HAIDYAGEHAPSVEVRVQALFGLDRHPNVGNTPLLIHLTSPAGRPLQATRDLPGFWRGSW
ADVRKDMKGRYPKHRWPDEPWTEKPSLKIKNAFRG
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatttgtcgggttggcagaaaccatgaccgatcttcccatcaacgccgtccttcca
gaactgctgacggctctttctgatgggaatggcgcagtgctggtcgcaccgccgggagcg
ggcaagacgacatctgtcgcccctgcattgctcgatgaaaaatggtgcagcggacagatc
attctgaccagcccgcgccgggtggccgcgcgcgctgcagcagagcgcatcgcgcagatg
ttgggtgaaccggtaggacagcaggtcggctatctcacgcggttggacagcaagacgagt
aaagcgacgcgtatcttcgtcgtgacggaggcgattctgatcaatcgcctgctggaagat
caggagctggcgggtgtttccgcactgttgttcgatgaagcgcatgaacgccatctcgac
agtgacctgggacttgcgctggcgctggagacacaaacggtgctgcgggaggacctgcgc
attgtcgtcatgtccgcaaccatagatggcgcgcgtttcgcccgtttgatgggggagccc
actaaagttatcgaaagcgcaggcattgcttacccccttaatctgcgctggcttggcagc
gcggcagagaggcgtctggaagaccagatgacctctgccgttctcacggcatggcgcgaa
caggagggcgacatactcgtattccttcccggcgtaggggagatagagcgggtgcgcgaa
cgtctggcgcagaaattgcccgataccccgatccttccgctgcacggacaaatccagcca
gaaaatcagcgcgccgcgatccgccgcgaccccgatggccaccgccgcatcgtactcgcc
acgtctattgcggaaacatcgctgacattggacggggttagcgtggtagtggattcaggg
cttgcgcgccgagcggaatttgaccgtgcggctggcaccagccacctcgtcacccagcgt
tcaagccaggcggctgcggcgcaaagggcagggcgtgcagtgcggcaggggccaggtgtg
gcctatcgcctgtgggaggaagcgggccatgccggacgaccgactttcgacgtgcccgaa
atgctgagcgccgatcttgcgccattaatcttgtcccttgcccgatggggcgtgacagat
cctgccagcctgcaatggctcgacacgccgcctgatgcatctgtcgcatccgcgcgtgca
aggctggctgcgctgggcgcgctcgacgatgacggagcgattacgccatggggcgagaaa
atcgcttcgctttcgcttgatcccgaaggtgcggctgccgtgcttcttgccgcgcagcat
gggcaggcagaggatgtcgcgcggctagtcttgttgacgcaggagcgcgggcttggcggg
cgaggagaggatttgctgcaacgcttgtcacgatggaatggggacaggcgcgcgcgggcg
caggcatcgcgcaaattggcatcatcctgggtgaaggcagcggaccggctggtaacgggg
aagcctgacaagccgcttgatccggcaatcttcattgcgctggcaaggccggattttgtt
gcgcgtcggcgcgatgcatcgggagaacactggatctcggcaggcgggcgcggctttgcg
ctagatcctgcttctccgctggcgcgggccgaatggctggtaatcgccgatgcgacaggg
caggccaagggcgcgcgcatcaccgctgccgcactgctggaccgcgcagatatagaacga
catctcgatcatctcatagaataccgcacgatagcccgctggaatgagagtgaaaaccgg
gtggaggcgcggcgccaacggcggctgggcgccataactttggcaagtggacccgatcct
gtccctgatggccgagtgcttgtggatattttggtggaaaaggcgggggaaaagctgggg
gaactgctgcccccaagcctgatcgcccgcgctcgttttgcaggcttggatagtctctcc
gaagtaagattgagggaaagtgcagaggcctggcttgccccgctccttgacggtcgacgc
gacctctcacttccggcttcccattacgccgaagctgcgctgggcctgcttgcatgggag
gaccgccagcaactcgattcccttgctccgcgacatttcaccagccctgccggaacaacg
catgccatagattatgccggtgaacacgcgcccagcgtggaagtgcgggtgcaggccctg
ttcgggctggaccgccatcctaacgtgggaaacacacccttgttgatccacctcactagt
ccggcgggaagacctttacaggccacacgcgaccttcccggtttctggcggggtagctgg
gctgatgtgcgcaaggatatgaagggccgctatcccaaacatcgctggccggatgaaccg
tggactgaaaaacccagcctcaaaatcaagaatgcctttcgcggataa
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