Aurantiacibacter atlanticus: CP97_08780
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Entry
CP97_08780 CDS
T03997
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ery
Aurantiacibacter atlanticus
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ery03016
]
CP97_08780
Enzymes [BR:
ery01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP97_08780
Transfer RNA biogenesis [BR:
ery03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP97_08780
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKQ42094
UniProt:
A0A0H4VG60
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All DBs
Position
complement(1793045..1794268)
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AA seq
407 aa
AA seq
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MQIHPLITDSQTLADLCERLAKHDFVCVDTEFMRENTYYPLLCLVQVGNEEEAAAIDPLA
NGIDLSPLLDLLCENDEVLKIFHAGGQDVEIVYNLTGKTPFPIFDTQIAMMAISQSEQIG
YANLVESWLNKTIDKGARFTDWSRRPLTERQIEYAIGDVTYLAKIFPRMLKKLIKTDRGH
WLNAEMEKLADPANYAADPEQAWRRIRAPGRNPTVLGRLKALAGWRESEAQDKDIPRGRI
IRDETLADIASHPPKKQEDLAKVRGLSNAWKENDIGKRLMRVLKNAEPLPDEEMPAKPKR
GAPLGKEGALVADLLKLLLKIRSREIDVASRLLTRSDELEALAAGVRKLQVLDGWRFEVF
GKDALELVEGKLAFAVEKGRLKMTHIDDVEAEAEAADASSAAESTTK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccatcctcttattactgattcccagaccctcgccgatctttgcgagcggctc
gccaaacatgatttcgtctgcgtggacacagagttcatgcgcgaaaacacatactatccc
ctgctctgcctggtacaggtcggcaacgaggaagaagctgcggcgattgatccgctggcc
aatggcatcgacctttcaccattgctcgacctgctgtgcgagaatgacgaggtcctgaaa
atattccacgctggcgggcaggatgtggaaatcgtctacaacctcaccggcaagacgccc
ttccccatcttcgatacgcagatcgcgatgatggccatcagccagtccgagcaaatcggc
tatgccaatctggtggaaagctggctcaacaagactatcgacaagggcgcgcggttcacc
gactggagccgccgccccttgaccgagcggcagatcgaatacgccatcggcgatgtcact
tatctggcgaaaatctttccccggatgctgaaaaagctcatcaagaccgaccgcggccat
tggctgaatgcggagatggaaaagctggcggacccggcgaactacgccgccgatcccgaa
caggcatggcggcgcatccgcgcgccgggtcgcaatccaacagttctgggacgactgaag
gcactggcaggctggcgcgaaagcgaggcgcaggacaaggacatcccgcggggccggatc
attcgtgatgaaactctggccgatattgccagccacccgcccaagaaacaggaagacctc
gccaaggtacgcggcctctccaatgcctggaaggaaaacgacatcggcaaacggctgatg
cgtgtcctgaaaaatgccgaaccgctgcccgacgaagaaatgcctgccaagcccaagcgt
ggcgcaccactgggcaaggaaggcgcgcttgtggctgatcttctcaagctgctgctcaag
atccgttcgcgcgaaatagacgtcgcatcgcgcctgctcacccggtcggacgagcttgag
gcgctggctgccggtgtgcgcaagctccaggtcctcgatggctggcgtttcgaagtattc
ggcaaggacgcgctcgagctcgtcgaaggcaagctcgcctttgcagtcgaaaagggccgc
ctcaagatgacgcatatcgatgacgtggaggccgaggcagaagctgccgatgccagctcg
gccgccgaatcaacgacgaaataa
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