Aurantiacibacter atlanticus: CP97_08975
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Entry
CP97_08975 CDS
T03997
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ery
Aurantiacibacter atlanticus
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ery03032
]
CP97_08975
03400 DNA repair and recombination proteins [BR:
ery03400
]
CP97_08975
Enzymes [BR:
ery01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CP97_08975
DNA replication proteins [BR:
ery03032
]
Prokaryotic type
DNA Topoisomerases
CP97_08975
DNA repair and recombination proteins [BR:
ery03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP97_08975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKQ42122
UniProt:
A0A0H4VBU4
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All DBs
Position
1838297..1840882
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AA seq
861 aa
AA seq
DB search
MNLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVRPDEGFAMDWEVYSDKRN
REQVKAIADAAKKADRLILATDPDREGEAISWHVMDLLKKRKALPDEVERVTFNAITRQA
VTEAMKAPRQLDTDLIDAYLGRRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLVCE
REREIEVFQPVEYWSVTAKMEHDGTAFDARLVRFDGEKLDRLSIGNKGTADAAKAAVEQG
RFTVEDVETKPLKRSPAPPFTTSTLQQEASRKLGYSASHTMRCAQSLYEAGSITYMRTDG
VGMDMGAIMACRDAIATRYDSNYKPEKPRFYKTKAKNAQEAHEAIRPTDFAKDRAGSGDE
AKLYDLIFKRAMASQMATAQLERTIVTMRDPTAKHELRATGQVVKFPGFLAVYSESFDEK
SDDDDDNLLPVMRKGDAPAKKAVDAVQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTI
QTLRDRDYVRMEKNRFFAEDSGRLLTAFLERFFSRYVAYDFTAEMEDELDEVSGGRAEYK
TLLENFWRDFKPKSDEVMERQPSEVTEVLDEFLADFLFPPREDGNPARFCPLCAEQGREG
GELHLRGGRYGAFIGCVNYPECNFRRKFGQPGDGDGSEDSVMGEDPDSGLPIERKTGRFG
PYVQMGEGKEAKRASIPKDLDDFDLDWAIKLLALPRIVGQHPETGKDIEAAIGRYGPYLR
HDGKYAKLTSTRDVFDTGMNAAVTLLAEAANRKGGGRAKAEPIKAFGAHPDSGGEMKVMP
GRYGPYVTDGTTNATIPKDMKPEDLTEEQAITMITEKAAKGPAKKKGRKKAPAKKKAPAK
KATAKKTAAKKPAAKKKAAEG
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagttatcgttgaatcgcctgctaaggcgaagactatcgagaaatatctgggc
aaggacttcaaggtactcgcttcctacggccacgtccgcgacctgccgccaaaagacggc
agtgtgcgtccggacgaaggctttgccatggattgggaagtctattcggacaaacgtaac
cgtgaacaggtgaaggccatcgcggatgctgccaagaaggcagaccgcctgattctcgcg
accgaccctgaccgcgaaggtgaggcgatcagctggcacgtcatggacctgctgaaaaag
cgcaaggcgctgcccgatgaagttgagcgagtgaccttcaacgccatcaccagacaggca
gtgaccgaggcgatgaaggcgccacgccagctcgatacggatttgatcgacgcctatctt
ggccgccgcgcgctcgattacctattcggatttacgctttccccggtgttgtggcgcaag
ctgcctggagccaaatctgccggccgtgtgcaatccgtcgcgctgcgccttgtctgtgag
cgagagcgtgagatcgaggttttccagccggtcgaatactggtccgttacggcaaagatg
gaacatgatgggaccgcgttcgacgcccgtctggtgcgttttgacggcgaaaagctggat
cgtctttccattggcaacaagggcactgcagatgcagccaaggctgcggtggagcagggc
cgtttcactgttgaagatgtcgagaccaaaccgctcaagcgcagcccggcaccgcctttc
acaacatccactctgcagcaggaggcctcgcgcaagctgggttattccgccagccacacg
atgcgttgtgcgcaaagcctctacgaagcaggctccatcacttacatgcgtactgatggg
gtgggcatggacatgggcgcaatcatggcgtgccgcgatgccatcgccacgcgctatgat
agcaattacaagcccgaaaagccccgcttttataagacgaaggcaaagaatgcgcaggaa
gcgcatgaagctatccgaccgacggattttgcgaaggatcgcgcgggatcgggggatgag
gccaagctttatgacctcatcttcaagcgcgcgatggcaagccagatggcaaccgcgcag
cttgagcgcactatcgtcacgatgcgcgacccaactgcaaagcacgagctacgcgccacc
ggacaggtggtgaaattccccggcttcctcgcagtctattctgaaagttttgatgaaaaa
tcagacgatgatgatgataatctgctgccggtaatgcgcaagggtgatgcgcccgccaag
aaggctgtcgatgcagtgcagcacttcacccagccaccgccacgcttttccgaagcaagt
cttgtcaaacggctggaggaattgggtatcgggcgaccgtcaacctatgcatccaccatc
cagaccctgcgtgaccgcgattacgtgcggatggagaaaaaccgcttcttcgcagaggat
tcaggtcggcttctgactgcgtttctggagcggtttttttcccgctatgtcgcctatgat
ttcaccgccgaaatggaggatgaactggatgaggtgagcggcgggcgtgccgagtacaaa
accttgcttgaaaacttctggcgagatttcaaacccaaaagtgacgaggtgatggaacgg
cagccttcggaagtaaccgaagtgctcgacgaatttctcgccgatttcctgtttccgcca
cgtgaagatggcaatccggcgcgcttctgcccgctttgtgcagagcaggggcgtgagggt
ggtgaactgcacttgcgcggtggccgctatggcgccttcattggctgtgtgaactaccct
gaatgcaatttccgccgcaaattcggccagccaggtgatggcgatggctctgaagacagt
gtgatgggcgaagaccctgacagtggcttgccaattgagcgcaagacaggccgtttcggg
ccctatgtgcagatgggagaaggcaaggaggcaaagcgtgcgtccatccccaaggatcta
gacgacttcgatctggattgggcgataaaattgctcgcccttccgcgcatcgtcgggcag
catcctgaaaccggcaaggatattgaagctgctattggtcgatacggtccttatctgcgg
catgacggcaaatatgccaagctgacctccacccgcgacgtgttcgatactggcatgaat
gcagcggttacactgctggctgaagcagccaatcgtaagggcggggggcgcgcaaaggca
gaaccgatcaaggcatttggcgcgcatcccgatagcggcggagaaatgaaggtgatgccg
ggccgctatggcccctatgtcaccgatggcacaaccaatgcgacgatccccaaggacatg
aagcccgaggatctgaccgaagaacaagccatcaccatgatcactgaaaaagcggccaag
gggccagccaagaagaagggccgtaagaaagcgccggcgaagaagaaagcacccgccaag
aaggctacagcgaagaagactgccgccaagaaacctgcggcaaagaagaaagcggcagaa
ggctga
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