Aurantiacibacter atlanticus: CP97_09255
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Entry
CP97_09255 CDS
T03997
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ery
Aurantiacibacter atlanticus
Pathway
ery03030
DNA replication
ery03430
Mismatch repair
ery03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP97_09255
03430 Mismatch repair
CP97_09255
03440 Homologous recombination
CP97_09255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ery03032
]
CP97_09255
03400 DNA repair and recombination proteins [BR:
ery03400
]
CP97_09255
Enzymes [BR:
ery01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP97_09255
DNA replication proteins [BR:
ery03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP97_09255
DNA repair and recombination proteins [BR:
ery03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP97_09255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
COE1_HLH
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKQ42164
UniProt:
A0A0H4VGE1
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All DBs
Position
1903782..1907270
Genome browser
AA seq
1162 aa
AA seq
DB search
MGAHIADMSHTPFVPLRVISSYSMLEGAIDPKAIAKLAKERGFPAIAICDRNGLYGSTMF
AGAAIAEGVQPIIGTLLGVIHVAGEQVDYLPLFAQDEDGWNNLCHLVSRAHLDRPLELEP
HVTMDDLTGHTDGLIALTGAAEGAVTRLLADGKERRAHDLAQQLSALFPDRLYVELARRG
NSVEDAAEAGLLDLAYAQNLPLVATNPANFAEPHMHSAHDAMLCIANTSQIDSEDRPTSN
PQSFVKTAAMMEELFADLPEATANTLVVAQRCAFSPPRRKPILPSLAGDLEGESRLLEED
ARKGLSARLEKYEDMSEDQLQIYVERLDYEVGIIRKMGFPGYFLIVADFIKWAKAQGIPV
GPGRGSGAGSLVAWALTITDIDPIRLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYV
QDRYGHDKVAQIITFGKMKARAVLRDTGRILQMPYGQVDRLTKMVPNHPTDPWTLPRTLN
GASDFKREYDNDNEVKRLVDLAMKLEGFPRNSSTHAAGVVIGDRPLSQLVPLYRDPRSDM
PVTQFDMKHVEDSGLVKFDFLGLKTLSVLRKAIDLLELRGITVDLETLEWDDPAVYELMK
RGDTVGVFQLESDGMRRTLTAVKPTKFEDIIALVSLYRPGPMDNIPLFGKRKAGEVEIEY
PHPKLKGILEETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDAQRQRFI
DGCGRVSGIQPKQANELFDLIDKFAGYGFNKSHAAAYALLSYQTGWVKTHYPEEFYAASM
CFDMHQSEKLAVFVDDARRNGVTLLGPDINHSEAEFSVEQTDEGWAVRYALAGIRNVGEK
AMEQVAAERLSHGPFQNLEDIFRRLPAGSMNRKQLEGLAGAGAFDGLEPNRAKIMANVDM
LLAVADAANREKASGQGGLFGGEDHAEPSLKLVKADPWTRPEQMAVERENFGFYFAAHPA
EEYRLIAASNGARSYAALMEAGVVGSRQKAVMAAMVEGMSKSRTKRGDEFIRADFSDSTG
QFSAACFEKALIENFQKWAQDGTCVLLNVELDAPNPEDPPRVTVVGARPLADVTSASRMQ
LKADVRDLAGLEALREILKPGRPGHGEVLVKLCIGEDSDPQVLLGRDFELGREMLDIFAT
IPGLKNVELSPIRGAGHLRLVA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgcatattgcagatatgtcccacacaccctttgtccccctgagagtcatctcc
agctattccatgctcgaaggggcgattgaccccaaggcgattgcgaagctggcaaaggaa
cgtggctttcccgctatcgccatctgcgaccgaaacggattgtatggctccaccatgttt
gctggtgctgccattgctgaaggtgttcagccgataatcggcaccttgcttggcgtgatc
catgtcgcaggagagcaggtcgattatctgccgctattcgcgcaggatgaggacgggtgg
aacaatctttgccacctcgtcagccgggcccatcttgatcgaccgctagagcttgaaccg
catgtgacgatggatgatctcaccgggcatactgatggtctgatcgcattgacgggcgcc
gctgaaggtgcggtgacgcgtctgctggcagacggtaaggaacggcgcgcacatgatctg
gcacagcagctttccgccctttttcctgatcgactgtatgtggaacttgcccgtcgcggc
aattctgtagaagacgccgcagaagccggcctgcttgatcttgcctatgcgcaaaatttg
ccgttggtcgccaccaatcccgccaatttcgcagaaccgcacatgcacagtgcgcatgat
gccatgttgtgtatcgccaacacttcgcagattgacagcgaagacaggcctacttccaat
ccgcaatctttcgtcaagacagccgcgatgatggaggaattgtttgcggatttgccggaa
gcgacggccaatacgctggtggtggcgcagcgttgtgccttttcgccgccgcgccgcaag
ccgattttgccaagtctcgctggtgatctcgaaggcgaatcccgcttgctggaggaggat
gcgcgcaagggcttgtctgcgcggctcgagaaatatgaggatatgtcagaggaccaattg
caaatctatgtcgaacggctcgattacgaagtcggcataattcgcaagatgggcttcccc
ggctattttctgatcgtggccgatttcatcaaatgggccaaggcgcagggcattccagta
gggccgggccgtggctctggcgcaggctccctggtggcatgggcgctgacgattacggac
attgatccgatccggcttggccttctgttcgaacgcttcctcaatcccgaacgcgtttcc
atgcctgacttcgacatcgacttttgcgaaacgcggcgaggcgaggtgatccgatatgtt
caggatcgctacggccatgacaaggtcgcccagataatcaccttcggcaagatgaaggcc
cgcgcggtgctgcgcgataccggccgcatattgcaaatgccctacggccaggtggaccgc
ttgaccaagatggtgccaaaccatccgaccgatccgtggaccttgccgcgcacgttgaac
ggtgcgtcggatttcaagcgcgaatatgacaatgacaatgaggtgaagcgccttgttgac
cttgccatgaagctggagggctttccgcgcaattcgtccacccatgcggcgggcgtggtg
attggcgatcgtcccttgagccagcttgtgccactctatcgtgatccgcgatcggatatg
ccggtcacccagttcgacatgaagcatgtcgaggattccggactggtgaagttcgatttc
ctcggtctgaagacactgagcgtgctgcgcaaggcgattgatctgcttgaactgcgcgga
attacggtcgatctcgaaacgctcgagtgggatgatcctgcggtttacgaattgatgaag
cgcggcgatacggtgggcgtattccagcttgaatccgatggcatgcggcgcacactgacc
gctgtaaaacccaccaagttcgaagacatcatcgcactcgtttcactctatcgccccggc
ccgatggacaacattccgctgttcggaaagcgcaaggcgggtgaggtggagatcgaatat
ccgcatcccaaattgaagggcatcctggaagaaacatacggcatcttcgtctatcaggaa
caggtcatgcaggcggcgcagatcctggccggatattcccttggcgatgcagatttgctg
cgccgtgcgatgggcaagaaggtgcaggcagaaatggatgcgcagcgccagcgcttcatc
gatggctgtggcagagtgtccggtatccagccgaagcaggcaaatgaactgttcgatttg
atcgacaaatttgccggttacggcttcaataaatcacacgctgctgcctatgcgctgctc
agctaccagacaggctgggtgaagacccattacccagaggaattctacgccgcctccatg
tgttttgacatgcaccagtcagaaaagctggcagtcttcgtggacgatgcccggcgcaat
ggtgtcacgctgctggggccggatatcaaccattccgaagccgaattctcggtcgagcag
acggatgagggctgggcggtgcgctatgccttggcaggcatccgcaatgtgggcgaaaag
gcgatggaacaggttgcggcagagcgcctgtcgcacggaccgtttcaaaacctcgaggat
atattcaggcgactgcccgcaggctccatgaaccgtaagcagctggaaggtctggcgggg
gcgggcgcctttgatggtcttgaacccaatcgagcgaagatcatggccaatgtggacatg
ctgctggcggtggcagacgcagccaatcgcgaaaaggccagcggacagggcggattgttc
ggcggtgaggaccatgccgagccctcgctcaaactggtgaaagcagacccctggacccga
ccggagcaaatggcggtggagcgggagaatttcggcttttactttgccgcccatccggca
gaagaatatcgtctgatagcggcatccaatggtgcacgaagctatgctgccttgatggaa
gcaggggtagtaggctcccgccagaaagcggtcatggcagcgatggtagaaggcatgagc
aagagccggacaaagcgcggggacgaattcatccgcgccgacttttccgattcaacgggc
caattcagcgccgcgtgttttgaaaaagcattgatcgagaacttccagaagtgggcgcag
gatggcacctgcgtgctcctcaatgtcgaattggatgcgcccaacccggaagatccgccg
cgggtaaccgttgttggtgcaaggcctcttgccgatgttaccagcgcatcgcggatgcag
ctgaaggccgatgtccgcgatctcgccggacttgaggcattgcgggagatattgaagccg
ggtcgtcccggacatggcgaagtgctggtgaagctatgcatcggcgaagatagtgatccg
caggtgctgctggggcgcgattttgaacttggcagagagatgcttgatatttttgccact
attccgggtctcaaaaatgtcgagctttcgcccatccgcggtgccggccatctccgattg
gtggcctga
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