Aurantiacibacter atlanticus: CP97_11645
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Entry
CP97_11645 CDS
T03997
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ery
Aurantiacibacter atlanticus
Pathway
ery03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ery00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP97_11645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ery03019
]
CP97_11645
03016 Transfer RNA biogenesis [BR:
ery03016
]
CP97_11645
Enzymes [BR:
ery01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CP97_11645
Messenger RNA biogenesis [BR:
ery03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP97_11645
Transfer RNA biogenesis [BR:
ery03016
]
Prokaryotic type
tRNA degradation factors
CP97_11645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
DUF5335
S1_2
OB_RRP5_4th
OB_PDCD11
YpzG
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AKQ42545
UniProt:
A0A0H4VDX7
LinkDB
All DBs
Position
complement(2391368..2393674)
Genome browser
AA seq
768 aa
AA seq
DB search
MFDKKTVSIEWGGKTLTLETGQIARQADGAVLATYGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSSAGRIPGGFFKREGRATEKETLTSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEPDIVAMIAASAALTISGLPFMGPIGAARVGYVDGEYVLNPSVNTIFDEGELDLVV
AATNDAVMMVESEAKELSEDVMLGAVMFAHEESRKVIGAIINLAEQAAKDPWEVDLSDDT
SAIKENLRGIVGDDIAAAYKLTDKSQRSDALNIARAKAKEAYADAEGQTQMSANKAVKKL
EAEIVRGAILKEGQRIDGRKTNEIRPIEAMVGLLPRTHGSALFTRGETQAICTTTLGTKD
AEQMIDGLEGLSYNHFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAWRALHPVLPAHED
FPYTIRILSDITESNGSSSMATVCGGCLAMMDAGVPIENPVSGIAMGLILEGDDYTVLSD
ILGDEDHLGDMDFKVAGSARGITSLQMDIKVAGITQEIMQTALAQASEGRAHILGEMTKA
LGTARGEVSRHAPRIETMQIDKAKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
DSDQIDAAKKWIEGIVEEAEVGKIYEGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGQDVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPPREKREGGGGGGRGG
DRRGPRGGGSGRGGDRGPRGGGGGRGGDRGGNDAGGNADHMPAFLKDD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaagaaaaccgtatcgattgagtggggcggcaaaaccctcaccctcgaaacc
ggtcagattgcccgtcaggctgacggcgccgttctggccacttatggcgagaccgtggtg
ctgtgcgccgtgaccgctgccaagagtgtgcgtgagggccaggatttcttcccgctcacc
gtccactatcaggaaaaattctcctccgcgggtcgcatccccggtggcttcttcaagcgc
gaaggccgcgctacggaaaaagagacactcaccagccgtttgatcgaccgtccggtccgt
ccgctgtttcccgaaggtttctacaacgaaatcaacgtgattgcgcaggttctttcctat
gatggcgagactgagccagatattgttgcaatgattgcagcatctgccgcgcttaccatt
tccggtctgcccttcatgggcccgatcggtgccgcgcgcgtcggctatgttgatggcgaa
tacgtcctcaaccccagcgtcaacaccatctttgacgaaggcgaactcgaccttgtcgtt
gccgccaccaatgatgcggtgatgatggtcgaatccgaagccaaggaactaagcgaagac
gtcatgctcggcgcggtaatgttcgcacatgaagaaagccgcaaggttatcggtgcgatc
atcaatctggccgaacaggctgccaaggatccgtgggaagtcgatctttcggacgatact
tccgcgatcaaggaaaacctgcgcggaatcgtgggcgatgacatcgccgcagcgtataag
ctgaccgacaaatctcagcgttccgatgcgctgaatattgctcgcgccaaggccaaggaa
gcttatgccgatgctgaagggcagacgcagatgagcgccaacaaggcggtcaagaagctg
gaagctgaaatcgtgcgcggtgccatcctcaaggaaggccagcgtattgacggccgcaag
accaacgaaatccgcccgatcgaggcgatggttggcctgttgccccgtacgcacggttcg
gcgctgttcacgcgcggtgaaacgcaggcgatctgcaccaccacgctgggcaccaaggat
gccgagcagatgatcgacgggctggaaggcctttcgtacaaccacttcatgctgcactat
aacttcccgccctattcggtcggcgaagtgggtcgcttcggcttcaccagccgccgcgaa
accggccacggcaagctcgcatggcgcgctctgcacccggttctgccggcgcatgaagac
ttcccatacaccatccgcattctgtccgacatcaccgagtcaaatggctcgtcctcgatg
gcaacagtatgtggcggctgtctggcgatgatggatgccggtgtcccgatcgagaacccg
gtatcgggcattgcgatgggcctcatcctcgaaggcgacgactacaccgtcctttcggat
attctgggtgacgaagaccaccttggcgacatggacttcaaggtggccggttccgcacgc
ggtatcaccagcctccagatggacatcaaggttgccggcatcacgcaggaaatcatgcag
accgcactggctcaggccagcgaaggccgtgcgcacatcctgggcgaaatgaccaaggca
ctgggcactgcccgtggcgaggtttcccgccatgctccgcgtatcgagaccatgcagatc
gacaaggccaagatccgtgacgttatcggcacaggcggcaaggtcatccgtgaaatcgtc
gccgaaaccggcgccaaggtcgacattgacgatgaaggcgtgatcaagatcagttcttcc
gacagcgatcagatcgacgccgcgaaaaagtggatcgaaggcatcgtggaagaagccgaa
gtcggcaagatctacgaaggcaaggtcgtcaacatcgtcgatttcggtgcattcgtgaac
ttcatgggtggcaaggacggtctcgtccacgtgtccgaaatgaagaacgaacgtgtcgaa
aagccgaccgatgtcgtctccgaaggtcaggacgtgaaggtcaaggtgctcgaaatcgac
cagcgcggtaaggtccgcctgtcgatgcgcgtcgtcgatcaggaaaccggcgaagagctg
gaagacacacgtcccccgcgcgaaaagcgtgaaggcggcggcggcggtggccgtggcggc
gatcgtcgtggtccgcgtggcggcggcagtggccgtggcggcgaccgtggcccgcgtggc
ggtggtggtggccgtggcggcgatcgcggcggtaatgatgctggcggcaatgccgatcac
atgcctgccttcctcaaggacgactaa
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