Erythrobacter sp. SDW2: LY632_01350
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Entry
LY632_01350 CDS
T10668
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
erys
Erythrobacter sp. SDW2
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LY632_01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erys03019
]
LY632_01350
03009 Ribosome biogenesis [BR:
erys03009
]
LY632_01350
04131 Membrane trafficking [BR:
erys04131
]
LY632_01350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
erys04147
]
LY632_01350
Messenger RNA biogenesis [BR:
erys03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LY632_01350
Ribosome biogenesis [BR:
erys03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LY632_01350
Membrane trafficking [BR:
erys04131
]
SNARE
SNARE associated proteins
Others
LY632_01350
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LY632_01350
Exosome [BR:
erys04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LY632_01350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
AAA_2
AAA_14
TIP49
AAA_33
RNA_helicase
IstB_IS21
nSTAND3
AAA_7
NPHP3_N
AAA_17
AAA_28
AAA_18
Mg_chelatase
AAA_3
ABC_tran
Parvo_NS1
TsaE
AAA_11
Sigma54_activat
DUF815
AAA_30
Zeta_toxin
AAA_lid_PRS2_C
AAA_24
NB-ARC
ATPase
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UIP07076
LinkDB
All DBs
Position
complement(283117..285423)
Genome browser
AA seq
768 aa
AA seq
DB search
MSDAESAVKERQARLQVAAARQEESGQGIARMPRTAFQTLGITEGDVVEIEGKRSTAAIA
MAAYPEDQGLEVVRLDGLQRGNAEAASGEHVIIRAAESRPATRVVFAPASREMRLQGPTQ
ALKRNFFRKPIVAGDLVATTGQQPVQNMPPEVRRMFNAPAYALTQIRLRVVSTVPKGVVH
IDEDTEVELRAEFEEAKAGRAVVNYDDVGGIDDTIQQLREMVELPLRYPELFTRLGVDPP
KGVLLHGPPGTGKTRLAQAVANESDAHFSIINGPEIMGSGYGESEKALREVFENAAKNAP
AIIFIDEIDSIAPKRDRVAGEAEKRLVAQLLTLMDGLETRANIVVIAATNRPDSIDEALR
RPGRFDREIVIGVPDEKGRREILGIHTRGMPLGKEVDLAELARMTYGYVGADLAALAREA
AIDAVRRIMPKIDLDAREVPQEVLEELCVERDDFFSALKRVQPSAMREVMVQMPNVGWDD
IGGVGDAIGKLKEGIELPLKNRDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAKEAEAN
FISMKSSDLLSKWYGESEQQIAKMFQRARAVAPCVIFIDEIDSLVPARGSGQGEPQVTGR
VVNTILAEMDGLEELQSVVVIGATNRPALVDPALLRPGRFDELVYVGTPDKAGREQILGI
HTSKMPLADDVRLADIAEKTERFTGADLEDVVRRAGLNALHRAGAEVKNVTAADFTEALA
DSRATVTGEMEAEYKKMQGELKKRAADVRPIGFVYDGMVSPTRDQKHG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcggaaagcgcagtgaaggaacggcaggcgcgcctgcaggtggcggcggcc
cggcaggaggaaagcggccagggcattgcccgcatgccgcgcaccgcgttccagacgctc
ggcattaccgaaggcgacgttgtcgaaatcgaaggcaagcgctcgactgcggctatcgcc
atggcggcctatccggaagaccagggtctcgaagtcgtccgcctcgacgggttgcagcgc
ggcaatgccgaagcggcctcgggcgagcatgtgattatccgcgccgccgaatcgcgcccg
gccacccgcgtcgtgtttgcgcctgccagtcgtgaaatgcggttgcaggggccgactcag
gcgttgaagcgcaacttcttccgcaagccgatcgtggcgggagacctggtcgccaccacc
ggccagcaaccggtccagaacatgccgcccgaagtgcgccgcatgttcaacgccccggcc
tatgcgctgacgcagatccgcctgcgtgtggtgtcgaccgtgcccaagggcgtggtccat
atcgacgaagacaccgaagtcgagctccgcgcggagtttgaggaagccaaggccggccgc
gccgtggtcaactacgacgatgttggcgggatcgacgataccatccagcagttgcgcgaa
atggtcgagctgccgctgcgctatcccgaactgttcacccggctgggggtcgatccgccc
aagggcgtgctgctgcacggtccgcccggaaccggcaagacccggctggcgcaggcggtc
gccaatgaaagcgacgcgcatttctcgatcatcaacgggccggagatcatgggctcgggc
tatggcgagagcgagaaggcgctgcgcgaagtgttcgagaacgcggccaagaacgccccc
gcgatcatcttcatcgacgagatcgactcgattgcgcccaagcgcgaccgcgtggcgggc
gaggccgagaagcggctggttgcccagttgctgacgctgatggacggactcgaaacccgt
gccaatatcgtggtgatcgcggcgaccaatcgccccgactccatcgacgaggcgctgcgg
cgtccgggccggttcgaccgcgaaatcgtgataggcgtacccgacgagaagggccgccgc
gagatccttggcatccacacccgcggcatgccgctgggcaaggaagtcgacctcgccgag
ctggcgcggatgacctacggctatgtcggggccgatctcgccgcgctggcccgcgaggcc
gcgatcgatgccgtgcgccggatcatgcccaagatcgacctcgatgcccgcgaagtaccg
caggaggtgctggaggaactctgcgtcgagcgcgacgatttcttttcggcgctcaagcga
gtccagccctcggccatgcgcgaggtcatggtgcagatgcccaatgtcggctgggacgac
attggcggcgtcggtgatgccatagggaagctcaaggaagggatcgagcttccgctaaag
aaccgggatgccttccgacgcctgggcattcgtccggccaagggattcctgctctatggc
ccgcccggaaccggcaagacccttctggccaaggccgtggccaaggaagccgaagccaac
ttcatctcgatgaagagcagcgacctgctgtccaaatggtatggcgagagcgagcagcag
atcgccaagatgttccagcgcgcccgggccgtggcaccctgcgtgatcttcatcgacgag
atcgacagcctcgtcccggcgcggggtagcgggcagggcgagccgcaggtgacaggccgc
gtggtcaacacgatccttgccgaaatggacgggctggaggaactccagtcggtggtagtg
atcggcgcgaccaaccgcccggcgctggtcgatccggcactgctgcggccgggccggttt
gacgaactggtctatgtcggcacacccgacaaggcgggccgggagcagatcctcggcatc
cacacatcgaagatgccgctcgccgatgacgtcaggctggcggatatcgcagagaaaacc
gaacgcttcaccggggctgacctcgaggacgtcgttcgccgagccggcctcaacgcgctc
catcgcgcgggcgccgaagtgaagaatgtgaccgctgccgattttaccgaagcgctggcc
gactcgcgcgccaccgtgaccggcgagatggaagccgaatacaagaagatgcagggcgag
ctgaagaagcgggccgccgacgtgcgtccgatcggcttcgtctacgatggcatggtttct
cccacgcgcgaccagaagcacggttag
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