Erythrobacter sp. SDW2: LY632_04155
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Entry
LY632_04155 CDS
T10668
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
erys Erythrobacter sp. SDW2
Pathway
erys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LY632_04155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erys03019
]
LY632_04155
03009 Ribosome biogenesis [BR:
erys03009
]
LY632_04155
Enzymes [BR:
erys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LY632_04155
Messenger RNA biogenesis [BR:
erys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LY632_04155
Ribosome biogenesis [BR:
erys03009
]
Prokaryotic type
rRNA helicases
LY632_04155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Pro_Al_protease
Motif
Other DBs
NCBI-ProteinID:
UIP07602
LinkDB
All DBs
Position
complement(849432..851255)
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AA seq
607 aa
AA seq
DB search
MIFTNLPASLRDALAQRGYAEATPVQAAVLEPEAAGRDLVVSAQTGSGKTVAFGLAMASE
LLDEAGKLRFAAGPLALVIAPTRELALQVSRELAWLYQAAGARIATCVGGMNPTKERQVL
RGGATIVVGTPGRLRDHLERGALDLSALAAVVLDEADEMLDMGFREELEEILDATPDSRR
TLLFSATMPKPIEALARRYQRDALRIATLGDQRGHGDIAYQAVTVSPPEIENAVVNLLRY
HEAETAILFCATRDNVRHLHATLQERGFAVVALSGEHSQQERNQALQALRDRRARVCVAT
DVAARGIDLPTLSLVVHVEIPRDAETLQHRSGRTGRAGKKGTAVLIVPFSRRRRVEEMLR
RAKIEAEWTDAPDRESIKARDRERLLDVLLQPVEIDEGDRELAERLLAEKSPEDIAAMLV
ASHRAKLPEPEDLLANTPEARRAAQQERHRPGFEDTVWFRMDIGRRRNADPRWILPLLCR
RGHITRNEIGAIRIAANETFFQIPRTVAGKFAAAVERTAGSEDDQEKILIEPSNEAPRDA
ARDNRREEPRDGRRDDRRGPPQRRDNARGPGGTERGPGGERPRVKPKPHRKGPGGGKPPF
KGKPKSR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgattttcaccaatcttcctgccagcctgcgcgacgcgctggcgcagcgtggctatgcc
gaggccacgccggtgcaggccgccgtgctcgaacccgaagcggcggggcgagatctggtc
gtctcggcccagaccgggtccggcaagaccgtcgccttcggactcgccatggcgagcgag
ctgctcgacgaagccggcaagctgcgcttcgccgccgggccgctggcgctggtcatcgcc
cccacgcgcgaactggccttgcaggtcagccgcgagcttgcctggctctaccaggccgca
ggcgcgcgcatcgccacctgcgtcggcggcatgaacccgaccaaggagcgccaggtgctc
cgcggcggggcaaccatcgtggtaggcacaccagggcgcctgcgcgaccatctggagcgc
ggggcgctcgacctgtcggcgctcgccgccgtggtgctcgacgaagccgacgagatgctc
gacatgggctttcgcgaggagctcgaggaaatcctcgacgcaacgcccgacagccgccgc
acgctgctgttctctgccaccatgcccaagccgatcgaagcgctggcgcggcggtaccag
cgcgacgcgctgcggatcgcgacgctgggcgaccagcgcgggcatggcgacatcgcctat
caggcggtgactgtctccccgcccgagatcgagaacgcggtggtcaatcttctgcgctac
cacgaggccgagacggcaatcctgttctgcgccacgcgcgacaatgtccgtcacttgcac
gccaccttgcaggagcgcggcttcgccgtcgtggccctgtctggcgagcattcgcagcag
gaacgcaaccaggcgctgcaagcgctgcgtgatcgccgtgcccgggtctgcgtagcgacc
gacgttgccgcacgcgggatcgacctgccgacgctgagcctcgtggtccatgtcgagatc
ccgcgcgatgcggagaccctgcagcaccggtcgggccgcaccggtcgtgcgggcaagaag
ggcaccgccgtgctgatcgtcccgttctcgcgccgccgccgggtcgaggagatgctgcgc
cgggcgaagatcgaggccgaatggaccgacgcgcccgaccgcgagtcgatcaaggccagg
gaccgcgagcggctgctcgacgtgctgctccagccggtcgagatcgacgaaggtgaccgc
gagctggccgagcggttgctcgccgagaagagccccgaggacattgccgccatgctggtg
gcgtcgcaccgggccaagctgcctgagccggaagacctgctcgccaacacgccggaagct
cgccgcgccgcgcagcaagagcgccatcgccccggtttcgaggacacggtctggttccgg
atggacatcggccgccgccgcaacgccgatccgcgctggatcctgccgctgctgtgccgc
cgcgggcacatcacccgcaacgaaatcggcgcgatccgcatcgccgccaacgagaccttc
ttccagataccgcgaaccgttgcgggcaaattcgctgccgccgtcgagcgcaccgccgga
agcgaagacgatcaggagaagatcctgatcgagccctccaacgaagccccacgcgatgcc
gcacgcgacaacaggcgtgaagagccacgcgatggtcgccgtgatgacagaaggggtccg
ccgcaacgccgcgacaatgcgcgtggtccgggcgggacggaacgaggcccaggcggcgag
cgtccgcgggtaaagcccaagccccatcgcaagggtcccgggggcggcaagccgccattc
aagggaaagccgaagagtcggtaa
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