Erythrobacter sp. SDW2: LY632_06390
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Entry
LY632_06390 CDS
T10668
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
erys Erythrobacter sp. SDW2
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erys03032
]
LY632_06390
03400 DNA repair and recombination proteins [BR:
erys03400
]
LY632_06390
Enzymes [BR:
erys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LY632_06390
DNA replication proteins [BR:
erys03032
]
Prokaryotic type
DNA Topoisomerases
LY632_06390
DNA repair and recombination proteins [BR:
erys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LY632_06390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UIP08017
LinkDB
All DBs
Position
1312105..1313118
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AA seq
337 aa
AA seq
DB search
MATAPTKLVYVDDSLPGITRKRAGKGWAYYDPQGGLITGSAERARLNAIALPPAYRDAWF
CPAANGHILATGYDDKGRKQYRYHPDFRTMKESEKFDACLAFGKLLPLVRKRVEEDLAER
KLTRERAIASVVRLLDLGAVRVGNEGYAKANASFGATTLRQRHAEVTAKTLRLRYKGKGG
KLQDVTVTDSSLARVVRRMQDLPGQHVFQYVDEDGDLQPVGSADVNEYLRETMGEDFTAK
NFRTWHASVVGLTCLYEADGKVPLKHMLDCVAGKLGNTPAIARKSYIHPAVIALVEKQDS
WREDTGLPRATRWLTREERALLDLLEEAPAAQELLAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcccccaccaagctcgtctatgtcgatgacagcctgcccggcattacccgc
aaacgagcgggcaaggggtgggcctattacgatccacagggcgggttgatcaccgggtcg
gcggaacgcgcccggttgaacgctatcgccttgcctcccgcctatcgcgacgcctggttc
tgcccggcggccaacggtcacatcctcgccaccggctatgatgacaagggccgcaagcag
taccgctaccaccccgatttcaggaccatgaaggaaagcgagaagttcgacgcctgcctc
gccttcggcaagctgctgccgctggtgcgcaagcgggtcgaggaagacctggccgagcgc
aagctgacccgcgagcgcgccatcgccagcgtggtgcgcctgctcgatctcggcgcggtg
cgggtcggcaacgaaggatacgccaaggccaacgccagcttcggcgcgacaaccctgcgc
cagcgccatgccgaagtgaccgcaaagaccttgcggctgcgctacaagggcaagggcggc
aaactgcaggacgtgaccgtcaccgacagcagcctcgcccgcgtggtgcggcggatgcag
gacctgcccggccagcacgtgttccagtatgtcgacgaggacggcgatctccagccggtc
ggctcggcggacgtaaacgaatatctgcgcgagaccatgggcgaggatttcaccgcgaag
aatttccgcacctggcatgccagcgttgtcggcctgacctgcctgtacgaagcggacggg
aaggtgccgttgaagcacatgctcgattgcgtcgccggcaagctgggcaataccccggcg
atcgcgcgcaagagctacatccatccggccgttatcgctttggtcgagaagcaggacagc
tggcgtgaagataccggcctgcctcgcgcgacacggtggttgacccgcgaggagagggcc
ctgctggatttgctggaagaggccccggcggcgcaagaactgcttgcagcctag
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