Erythrobacter sp. SDW2: LY632_06750
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Entry
LY632_06750 CDS
T10668
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
erys Erythrobacter sp. SDW2
Pathway
erys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LY632_06750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erys03021
]
LY632_06750
03400 DNA repair and recombination proteins [BR:
erys03400
]
LY632_06750
Enzymes [BR:
erys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LY632_06750
Transcription machinery [BR:
erys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LY632_06750
DNA repair and recombination proteins [BR:
erys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LY632_06750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
UIP08086
LinkDB
All DBs
Position
1367488..1368543
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPTQLELKDSGDKARKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPAEVKAGDI
AVSGDIEVMNKDLVICHLDEGATLNMELTADTGKGYVPAVQNRPIDAPIGLIPVDSLYSP
IRQVSYKVENARVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPQSTMIGVAAEPQESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaacaccaagaactggcaggaactcaagaaacccactcagctcgaactgaag
gacagtggcgacaaggcccgcaaggcgaccttcgttgccgaaccgcttgagcgcggcttc
ggcctcaccctcggcaacgcgctgcgccgcgtgctgctctcgtcgctccagggtgcggcg
ataacctcgatcaagatcgagaacgtgctgcacgaattcagctcgcttgccggcgtgcgt
gaagacgtgaccgacatcgtcctcaacgtgaagcagatcgcgctgaagatggaaggcgaa
ggccccaagcggctgcagctgtccgccaccggcccggctgaagtcaaggccggcgacatc
gccgtctcgggtgacatcgaagtgatgaacaaggatctggtgatctgccatctcgacgaa
ggcgcgacgctgaacatggaactgaccgccgacaccggcaagggttacgttccggccgtt
cagaaccgcccgatcgatgcgccgatcggcctgatcccggtcgactcgctctactcgccg
atccgccaggtcagctacaaggtcgagaacgcccgcgtcggccaggaactcgactacgac
aagctgagcctgaccgtcgaaaccgatggcaccgtcacccctgaagacgcggtggcctat
gccgcgcgcatcctgcaggaccagttgacgctgttcgtccacttcgaagacggcatcccg
cagccgcagagcaccatgatcggtgtcgctgccgagccgcaggaatcggacgccaaccag
ctcaaccgctacctcctcaagaaggtcgacgagctggaactgtcggtccgttcggccaac
tgcctcaagaacgacaacatcatctacatcggcgacctggtccagaagaccgaagccgag
atgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtgctctcc
agcatgggcctgcgcctcgggatggacatcccgggctggccgccggagaacatcgaggaa
atggccaagaagctcgaacaggagctgctgggctga
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