Erythrobacter sp. SDW2: LY632_07815
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Entry
LY632_07815 CDS
T10668
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
erys Erythrobacter sp. SDW2
Pathway
erys03030
DNA replication
erys03430
Mismatch repair
erys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LY632_07815 (dnaE)
03430 Mismatch repair
LY632_07815 (dnaE)
03440 Homologous recombination
LY632_07815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erys03032
]
LY632_07815 (dnaE)
03400 DNA repair and recombination proteins [BR:
erys03400
]
LY632_07815 (dnaE)
Enzymes [BR:
erys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LY632_07815 (dnaE)
DNA replication proteins [BR:
erys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LY632_07815 (dnaE)
DNA repair and recombination proteins [BR:
erys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LY632_07815 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
COE1_HLH
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UIP05624
LinkDB
All DBs
Position
1594769..1598263
Genome browser
AA seq
1164 aa
AA seq
DB search
MAFAPFVPLRVLSSFSMLEGAIDPKALAKLAKDRGYPAIAVCDRNGLYGSVAFAGACKDE
GVQPIIGALVGVARPGSDQIDSLPLYAQDDAGYLNLCHLVSKAHLDRPVELSPHVRFEHF
AGHTDGLIALTGASEGGLTRLLADGQHDHAARYADRMEALFPGRLYVELARRGNAVEADA
EEALIELAYARNLPLVATNPANFAEPHFHKAHDAMLCIAGGYKLDEDERPRTDREAWVKS
ARMMEEIFSDLPEATANSLVIAQRCAYAPPYRKPILPSLAGDLEGEERMLREQATAGLEK
RLEPYENLAEADREAYFQRLDYEIGIINRMGFPGYFLIVADFIQWAKDNGIPVGPGRGSG
AGSLVAWALTITDLDPIRLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQRYGHD
KVAQIITFGKLKARAVLRDVGRIADYGYNRTDRLCKMVPNHPTDPWTLPRALNGSAEFKA
EYDNDNDTKALIDLAMQLEGLPRNSSTHAAGVVIGDRPLSELVPLYRDPRSDMPVTQFDM
KYVESSGLVKFDFLGLKTLSVLQKAVDLLGRRGIGVDLGALAWDDPAVYELLKSGNTVGV
FQLESEGMRRTLTAVKPTKFEDIIALVSLYRPGPMDNIPLFGKRKAGVEPIVYPHPKLEE
ILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKNQAEMDQQRARFIEGCGTVS
GIDAVKASELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFYAASMCFDMHQS
EKLSVFVDDARRYPLVEGGVVVAPPDINASEAEFTVERTEDGYAVRYALAGIRNVGEKAM
AAIVSEREAAGPFASLADLFERLPQGAMNSRQLEALIAAGALDSLEPNRGLLAANVDLLL
ATADAALRERTSGQEALFGAEDLGTGDALRLKEADDWDRATRMAKERENFGFYFSAHPVE
SYREIASANGARSYASVMESGAPAGGRGKAIMAAMVEKVNVGTTRRGAQFVRADFSDSSG
QFSAACFEDSLVENFRKWAEDGTCVLLTVELDSPSPDEPPRITVRGARPLDAVAGSQRML
LTLDVESQLALGELQLALRPGEEGHGEVQVRLQLGEGEHCLMRLGHDFRLDGKLAEQLQA
VEGISNVNLIPKTGPQGRRFSRAA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgctcccttcgtcccgctgcgcgtgctgtcgagtttctcgatgctcgaaggg
gcgatcgatcccaaggcgctggccaagctggccaaggatcgcggctatcccgctatcgcc
gtttgcgaccgcaacggcctctatggctcggttgccttcgccggggcgtgcaaggatgaa
ggggtccagccgatcatcggcgcgctggtgggggtagcacggccgggctcagaccagatc
gacagcctgcctctctatgcccaggacgacgccggttatctcaacctgtgccacctcgtc
agcaaggcgcatctcgaccgtccggtcgagctatcgccgcacgtccggttcgagcacttc
gcggggcataccgacggattgatcgcgctcaccggcgccagcgagggcgggctgacgcga
ctgttggccgatgggcagcacgatcacgctgcgcgctatgcggaccggatggaggcactg
tttccggggcggctctatgtcgagctggcgcgacgcggcaacgcggtcgaggccgatgcg
gaagaggcgctgatcgaactcgcctatgcgcgcaatttgccgttggtggcgaccaacccc
gccaatttcgccgagccccatttccacaaggcgcatgacgcgatgctgtgcatcgccggt
ggctacaaactcgacgaggacgagcgcccgcgcaccgaccgcgaggcatgggtcaagtcg
gcgcggatgatggaggaaatcttctccgacctgccggaagcgaccgccaactcgctcgtc
attgctcagcgctgcgcctacgcgccgccctatcgcaagccaatcctgccgagtctcgcc
ggcgatctcgaaggcgaggaacggatgctgcgcgagcaggcgaccgccgggctggagaag
cggctggagccttacgaaaacctggccgaagcggatcgcgaagcctatttccagcggctc
gactacgaaatcggcatcatcaaccggatgggctttccgggctacttcctgatcgtggct
gacttcatccagtgggccaaggacaatggcataccggtggggccggggcgcgggtccggg
gcaggctcgctggtcgcatgggcgctgaccatcaccgatctcgatccgatccggctgggg
ctgctgttcgaacgcttcctcaacccggaacgcgtgtccatgccggacttcgatatcgac
ttctgcgaaacgcggcgcggcgaggtgatccgctacgtccagcagcgctatggccatgac
aaggtcgcgcagatcatcaccttcggcaagctcaaggcgcgcgcggtgctgcgcgatgtc
gggcgcattgccgactatggctacaaccgcaccgatcgcctgtgcaagatggtgcctaac
catccgaccgatccgtggacgctgccgcgcgcgctcaacggttcggccgagttcaaggcc
gaatacgacaacgacaacgacaccaaggcgctgatcgacctcgcgatgcagctggaaggg
ctgccgcgtaacagctcgacccatgccgcgggtgtggtgatcggcgaccggccgctgagc
gagctggtcccgctctaccgcgatccgcgctccgacatgccggtgacccagttcgacatg
aaatatgtcgaaagctcgggcctggtgaagttcgacttcctcggcctgaaaacgctgtcg
gtgctgcagaaggcggtcgatttgctgggcaggcgcggcatcggcgtcgatctcggcgcg
ctcgcgtgggacgatccggcggtctacgaactgctcaaatcgggcaacaccgtgggcgtt
ttccagctggaatcggaagggatgcgccgcacgctgacggcggtgaagccgaccaagttc
gaagacatcatcgcgcttgtctcgctctatcgcccgggcccgatggacaacatcccgctg
ttcggcaagcgcaaggccggtgtggaaccgatcgtctatccgcatcccaagctggaggaa
atcctcgccgagacctacggcatcttcgtctaccaggaacaggtgatgcaggctgcgcag
atcctcgccggctattcgctcggcgatgcggacctgttgcgccgcgccatgggcaagaag
aaccaggcggaaatggaccagcagcgtgcccggttcatcgaaggctgcggcacggtgtcc
ggcatcgatgcggtgaaggcgagtgagctgttcgacttgatcgacaagtttgccggttac
ggcttcaacaagtcgcacgccgccgcctatgcgctgcttgcctatcagaccgcgtggctc
aaggcgcattatccggaagaattctacgccgcttcgatgtgcttcgatatgcaccagtcg
gaaaagctcagcgtgttcgtcgacgatgcgcgccgctatcccctggtcgaagggggagtg
gtggtcgcgccgcccgatatcaatgcatccgaagcggagttcacggtcgagcggaccgag
gatggctatgccgtgcgttatgcgctcgcgggcattcgcaatgtcggggagaaggcgatg
gcggcgatcgtttccgagcgcgaagcggcgggccctttcgccagcctcgccgacctgttc
gagcgcttgccgcaaggggcgatgaattcgcgccagctcgaagcgctgatcgcggcaggc
gcgctcgatagcctcgagcccaatcgcgggctgctcgccgccaatgtcgatctgctgctc
gccaccgccgatgccgccttgcgcgagcggaccagcgggcaggaggcgctgttcggtgca
gaggacctcggcaccggcgacgcgttgcggctcaaggaggccgacgactgggaccgcgcc
acccgcatggccaaggagcgcgagaacttcggcttctatttctccgctcaccccgtcgaa
agctatcgcgaaatcgccagcgccaatggcgcgcgctcctatgcctcggtgatggagagc
ggggccccggccggcgggcgcggcaaggcgatcatggcggcgatggtcgagaaggtgaat
gtgggcaccacacggcgcggggcgcagttcgtgcgggccgatttctccgacagttccggc
cagttcagcgccgcctgtttcgaggattcgctggtcgagaacttccgcaaatgggccgag
gacggcacctgcgtgctgctcacggtcgaactcgattcgccgtcgccggacgagccaccg
cgcatcaccgtgcgcggggcgcgcccgctcgatgcggtggcgggtagccaacggatgctg
ctgacgctcgatgtcgagagccagttggcactgggcgagctgcaactggcgcttcggccg
ggtgaggaagggcatggcgaggtgcaggtgcgattgcaactgggagagggcgagcactgc
ctgatgcggctgggccacgacttccggctcgacggcaagctggccgagcagttgcaggcg
gtcgagggcatcagcaacgtcaatctgattccgaagaccgggccgcaagggcgtcgcttc
agccgcgcggcctga
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integrated database retrieval system
