Erythrobacter sp. SDW2: LY632_09940
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Entry
LY632_09940 CDS
T10668
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
erys Erythrobacter sp. SDW2
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LY632_09940 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erys03019
]
LY632_09940 (rnc)
03009 Ribosome biogenesis [BR:
erys03009
]
LY632_09940 (rnc)
03036 Chromosome and associated proteins [BR:
erys03036
]
LY632_09940 (rnc)
Enzymes [BR:
erys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LY632_09940 (rnc)
Messenger RNA biogenesis [BR:
erys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LY632_09940 (rnc)
Ribosome biogenesis [BR:
erys03009
]
Eukaryotic type
90S particles
RNase
LY632_09940 (rnc)
Prokaryotic type
rRNA processing factors
LY632_09940 (rnc)
Chromosome and associated proteins [BR:
erys03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LY632_09940 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
HTH_22
Motif
Other DBs
NCBI-ProteinID:
UIP06021
LinkDB
All DBs
Position
2037028..2037699
Genome browser
AA seq
223 aa
AA seq
DB search
MTILAPETRDWLIGHGFAVSDDELWLEALTHGSTGAMRDYQRLEFLGDRVLGLAISDHLY
RNVGGAEGALAQRLNALVSKSACAKVARHLGVSEHVVLGKQAREDGAAKSTNIMGDVMES
LLGANYLEAGYGPTAALVHKFWAEDLDGKTGRSKHPKSALQEWAAGNQRRPPEYTLVDRS
GPDHQAIFTVRVEVRKVGAAEATASSKQEAETAAAKLFMEQYG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgactatactcgccccggagacccgtgactggctgatcggacatggctttgccgtttcc
gacgacgagctgtggctggaagcactgacgcacggcagcaccggggccatgcgcgactac
cagcggctcgagtttctgggtgaccgggtgctgggcctcgccatttccgaccatctctat
cgcaatgtcggcggggccgagggtgcactggcccagcggctcaacgctctggtgagcaag
agtgcctgcgccaaggtcgcccggcatctcggcgtcagcgagcatgtcgtactcggcaag
caggcgcgcgaggacggcgcggccaagagcaccaatatcatgggcgatgtgatggagtcg
ctgctcggcgcgaactatctcgaggccggatatggtccgactgccgcgctggtgcacaag
ttctgggccgaggatctcgacggcaagaccggccggtccaaacatccgaaatcggcgctg
caggaatgggccgccggcaaccagcgccgcccgccggaatacacgctggtcgaccggtcc
gggcccgaccaccaggcgatcttcacggtccgcgtcgaagtccgcaaggtgggtgcggcc
gaagccaccgccagcagcaagcaggaagcggaaacggccgccgccaaacttttcatggag
cagtacggttga
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