Erythrobacter sp. SDW2: LY632_13260
Help
Entry
LY632_13260 CDS
T10668
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
erys Erythrobacter sp. SDW2
Brite
KEGG Orthology (KO) [BR:
erys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erys03009
]
LY632_13260 (rimO)
Enzymes [BR:
erys01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LY632_13260 (rimO)
Ribosome biogenesis [BR:
erys03009
]
Prokaryotic type
ribosomal protein modification factors
LY632_13260 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UIP06636
LinkDB
All DBs
Position
2709825..2711198
Genome browser
AA seq
457 aa
AA seq
DB search
MSITTTSIADQKKVGMVSLGCPKALVDSERILTRLRADGYAMSPDYAGADVVLVNTCGFL
DSAKEESLAAIGEAIAENGRVIVTGCMGEEAEAIRAAHPSVLAITGAHQYEAVVEAVHTH
APPSQGPFIDLIPQTDVKLTPRHYSYLKISEGCNHSCAFCIIPQLRGKLASRRIDAVLRE
AEKLVAAGTRELLVISQDTSAYGVDTRHEARTWKGREVRAHMTDLARELGQLRTPEGAQP
WVRLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPSVLRAMKRPANEAKVLERLKSW
RDICPDIAVRSSFVVGFPGETEDDFRYLLDWLEEAQLDRVGAFRFEPVEGAQANALPDPV
PEAVKEERYARIMEVTERISAAKLAAKVGKVLPVIIDEVGEPDEDGDIGATGRSQADAPE
IDGAVYLRNVAATLAPGEIARARIEDADAHDLYGVIA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaccactacctcgatagccgaccaaaagaaggtcggcatggtttccctcggc
tgccccaaggcgctggtcgatagcgaacgcattctcacccggctgcgggccgacggctat
gccatgtcccccgactatgccggggccgacgtggtgctggtcaacacctgcggcttcctc
gacagcgccaaggaagaaagtctcgccgccattggcgaagcgatcgccgagaacggccgg
gtcatcgtcaccggctgcatgggcgaggaggccgaggcgatccgcgcggcgcatccgagc
gtgctggcgatcaccggcgcgcatcagtacgaggcggtggtcgaggcggtgcacacccac
gcgccgccaagccaggggccgttcatcgacctgatcccgcagacggatgtaaagctgacc
ccgcgccactatagctatctgaagatttccgaaggctgcaaccactcctgcgccttctgc
atcattccgcaactgcgcggcaagctcgccagccgccggatcgacgcggtgctgcgcgag
gcggagaagctggtcgcggcgggcaccagggaactgctggtcatcagccaggacaccagc
gcctacggcgtcgatacccggcacgaggcccggacatggaagggccgcgaggtccgcgcg
catatgaccgacctggcccgcgagctgggccagctgcgcaccccggaaggcgcacagccg
tgggttcggctgcactatgtgtacccctatccgcatgtcgatgcggtcatcccgctgatg
gccgagggactgctgacaccctatctcgacattccgttccagcacgcctcgccctcggtc
ctgcgcgcgatgaaacgcccggccaacgaggccaaggtgctcgagcggctcaagagctgg
cgcgatatctgccccgacatcgcggtccgcagcagcttcgtggtcggtttccccggcgag
accgaggacgacttccgctacctgctcgactggctcgaggaagcgcagctcgaccgcgtc
ggcgcgttccgcttcgaaccggtcgaaggcgcgcaggccaatgccctgcccgatccggtg
cccgaagcggtcaaggaagaacgctatgcccggatcatggaagtgaccgaacgcatcagt
gccgccaagcttgcggccaaggtcggcaaggtgttgccggtgatcatcgacgaagtcggc
gagcccgacgaggatggcgatatcggcgccaccgggcgcagccaggccgatgcgccggag
atcgatggtgcggtctacctgcgcaatgtcgcggcaacgctcgcgccaggcgagatcgcc
agggcccggatcgaagatgccgacgcgcacgatctgtatggcgttatcgcctag
DBGET
integrated database retrieval system
