Erythrobacter sp. JK5: KDC96_01450
Help
Entry
KDC96_01450 CDS
T10266
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eryt Erythrobacter sp. JK5
Pathway
eryt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDC96_01450 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eryt03019
]
KDC96_01450 (pnp)
03016 Transfer RNA biogenesis [BR:
eryt03016
]
KDC96_01450 (pnp)
Enzymes [BR:
eryt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KDC96_01450 (pnp)
Messenger RNA biogenesis [BR:
eryt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KDC96_01450 (pnp)
Transfer RNA biogenesis [BR:
eryt03016
]
Prokaryotic type
tRNA degradation factors
KDC96_01450 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
Borrelia_REV
LPD3
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QUL38117
LinkDB
All DBs
Position
310061..312376
Genome browser
AA seq
771 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAARSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKREGRATEKETLTSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEPDVVAMIAASAALTLSGVPFMGPIGAARVGYTNDGEYVLNPSISDALGEDGRLDL
IVAATNDAVMMVESEAKELTEEEMLGAVMFAHDECKKVVGAIIDLAEQAAKDPWELDPVE
DKSAKMDKLRAAIGADLEAAYKLTNKSERQNAVNAAREKAREAFADLAESDPAEYLGTLK
LVKKLESDIVRGSIIKDGTRIDGRKLDQVRPIEAIVGLLPRTHGSALFTRGETQAICTTT
LGTKDSEQMIDGLEGLSYNNFMLHYNFPPYSVGEVGRFGFTGRREIGHGKLAYRALHPVM
PDAEEFPYTIRVLSDITESNGSSSMATVCGGALSMMDAGVPLKRPVSGIAMGLILEGDDF
AVLSDILGDEDHLGDMDFKVAGSEEGITSLQMDIKVAGITKEIMEKALDQAKAGRAHILG
EMAKALTGARTEVSKHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVI
KISSSNADEIEAARKWIEGIVEEAEVGKIYTGKVVNIVDFGAFVNFMGGKDGLVHVSEMK
NERVEKPTDVVSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPPREPRGDRGP
RSDRGDRGGRGGDRRGGRGGRGPRRDGGGDRDGNRDGGNDGPAAMPDFLKD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaaaaccctcactctggaaacc
ggccgtattgcccgtcaagccgacggcgccgttctggccacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgccgcccggtcggtgaaagaggggcaggacttcttcccgctcacc
gtccactaccaggaaaaattctccgcagccggccgtatcccgggtggcttcttcaagcgc
gaaggccgcgccacggaaaaggaaacgctcaccagccgtctgatcgaccgcccggtgcgt
ccgctcttccccgagggcttctacaacgaaatcaacgttatcgcgcaggtcctctcctac
gacggcgagaccgagccggatgtggtcgcgatgatcgccgcgtcggccgctctgacgctt
tcgggggttccgttcatgggcccgatcggcgccgcgcgcgttggctacaccaatgacggc
gaatatgtcctcaaccccagcatcagcgatgctctgggcgaagacggtcgcctcgacctg
atcgtagccgcgaccaacgacgcggtgatgatggtcgaatccgaggccaaggagctgacc
gaagaggaaatgctcggcgcggtgatgttcgcgcatgacgagtgtaagaaggtcgtcggt
gcgatcatcgatctggccgaacaggccgccaaggatccgtgggagctcgacccggtcgaa
gacaagtcggccaagatggacaagctccgcgctgccatcggcgccgacctcgaagcggcc
tacaagctcaccaacaagtccgaacgccagaacgcggtcaatgcggctcgcgaaaaggcg
cgcgaagcctttgccgatctcgcagaaagcgatccggcggaatatcttggcacgctgaag
ctggtgaagaagctcgaaagcgacatcgttcgcggttcgatcatcaaggacggcacgcgc
atcgacgggcgcaagctcgatcaggtgcgcccgatcgaagcgatcgtcggcctgctgccg
cgcacgcatggttcggcactgttcacccgcggtgaaacgcaggcgatctgcaccaccacg
ctgggcacgaaggattccgagcagatgatcgacgggctggaaggcctctcgtacaacaac
ttcatgctgcactataacttcccgccctattcggtcggcgaagtgggccgtttcggcttt
accggtcggcgtgaaatcggccacggcaagctcgcctatcgcgcgctgcaccccgtgatg
cccgatgccgaggaattcccgtacacgatccgcgttctgtccgacatcaccgagtccaac
ggctcgtcctcgatggcgaccgtctgcggcggcgcgttgtcgatgatggacgcgggcgtt
cccctcaagcgtccggtttcgggtatcgccatgggcctgatcctcgaaggcgacgacttt
gcggtcctgtccgacatcctgggtgacgaagaccacctcggcgacatggacttcaaggtt
gccggttcggaagaaggcatcaccagccttcaaatggacatcaaggttgccgggatcacc
aaggagatcatggaaaaggcgctcgatcaggcaaaggccggccgcgcgcatatcctgggt
gaaatggccaaggcgctcaccggggcccgcaccgaggtctccaagcacgctccgcgtatc
gagacgatgcagatcgacaagtcgaagatccgcgacgtcatcgggacgggcggcaaggtg
atccgcgagatcgtggccgaaaccggcgccaaggtggacatcgacgacgagggcgtgatc
aagatcagctcctcgaacgccgacgagatcgaagccgcacggaagtggatcgaaggcatc
gtcgaggaagccgaagtcggcaagatctacaccggcaaggtcgtcaacatcgtcgatttc
ggcgcgttcgtgaacttcatgggcggcaaggacggtctcgtccacgtctccgaaatgaag
aacgagcgggtcgaaaagccgaccgatgtcgtcagcgaaggccaggaagtgaaggtcaag
gtcctcgagatcgaccagcgcggcaaggtccgcctgtcgatgcgggtggtcgaccaggaa
accggcgaagagctcgaagatacccgcccgccgcgcgaaccgcgtggtgaccgtggtccc
cgcagtgatcgcggtgatcgcggtggccgtggcggggatcgccggggcggtcgcggaggt
cgcggtccgcgtcgcgatggcggcggcgatcgtgacggcaatcgcgatggaggcaacgat
ggccccgccgcgatgcccgacttcctgaaggactag
DBGET
integrated database retrieval system
