Erythrobacter sp. JK5: KDC96_02650
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Entry
KDC96_02650 CDS
T10266
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eryt Erythrobacter sp. JK5
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eryt03032
]
KDC96_02650
03400 DNA repair and recombination proteins [BR:
eryt03400
]
KDC96_02650
Enzymes [BR:
eryt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KDC96_02650
DNA replication proteins [BR:
eryt03032
]
Prokaryotic type
DNA Topoisomerases
KDC96_02650
DNA repair and recombination proteins [BR:
eryt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KDC96_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QUL38334
UniProt:
A0A975JKP5
LinkDB
All DBs
Position
562473..563483
Genome browser
AA seq
336 aa
AA seq
DB search
MEKLIYVDDGLPGITRKGAGTGFAYYTPDGDLIRSRKERARLNAIALPPAYRDAWFCPMA
NGHILATGYDDKARKQYRYHPDFRTLREGEKFDRAREFGERLPAMRRRVERDIKGDEATR
SRVLAAVVRLLDMGFVRIGNEVYKKTNNSFGASTLKDRHATISGSSVELRFVGKGGKERR
VALQDEELARAVEDARDVPGDHLFQYHDADGERQSIGSADVNDYIRETMDEQFSAKGFRT
WHASVLAFSMLAEARERPTISAVLEEVSDKLGNTPTVARNSYIHPAVIDILSRDNGWEEW
REKQELPRATRYLTRHERGLLALLDEAPQAAELLAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcttatctatgtcgatgacgggttgccgggcatcacgcgcaagggcgcgggg
acgggatttgcctattacacgcccgacggcgacctgatccggtcgcgcaaggagcgggct
cggttgaacgcgatcgcgcttccaccggcctatcgcgatgcttggttctgtcccatggcc
aacggtcatatccttgccaccggctatgacgacaaggcgcgcaagcaatatcgctatcac
cccgatttccggactttgcgcgaaggcgaaaagttcgatcgggcgcgcgaattcggcgaa
aggctgcccgcaatgcgccgccgcgtcgaacgcgacatcaagggcgacgaggcgacgcga
agccgggtcctcgcagcggttgtgcggctgctcgacatggggttcgtgcggatcggcaac
gaggtctacaagaagaccaacaactccttcggtgcttccaccctcaaggatcggcacgcg
accatatcgggcagttcggtcgaactgcgcttcgtcggcaagggcgggaaagagcgccgc
gtcgccttgcaggacgaggagcttgcccgcgcggtcgaggatgcgcgcgatgtgcccgga
gatcacctgttccagtatcacgacgcggacggcgagcggcagtcgatcggcagcgccgac
gtcaacgactacatccgcgaaaccatggatgaacaattttcggccaagggctttcgcacc
tggcatgccagcgtgctcgccttctcgatgctggccgaggcgcgcgagcgcccgaccatt
tccgctgtgctcgaagaggtttccgacaagcttggcaacacaccgacggtggcgcgcaac
agctatattcacccggccgtgattgacatcctttcacgcgacaacggctgggaagagtgg
cgcgagaagcaggaactgccgcgcgcgacgcgatacctcacccggcacgagcgcggcctg
ctggcgctgctggacgaggccccgcaggcggcggaactgcttgccgcctag
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