Erythrobacter sp. JK5: KDC96_03395
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Entry
KDC96_03395 CDS
T10266
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eryt Erythrobacter sp. JK5
Pathway
eryt03420
Nucleotide excision repair
eryt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDC96_03395
03430 Mismatch repair
KDC96_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eryt03400
]
KDC96_03395
Enzymes [BR:
eryt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDC96_03395
DNA repair and recombination proteins [BR:
eryt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDC96_03395
MMR (mismatch excision repair)
Other MMR factors
KDC96_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QUL39326
LinkDB
All DBs
Position
complement(701133..703376)
Genome browser
AA seq
747 aa
AA seq
DB search
MNPPQREAVLTTEGPVLMLAGAGTGKTAALTSRLAHLVATRRAWPSQILCVTFTNKAARE
MRGRVAEHLGQAVEGMPWLGTFHSICAKMLRRHAELVGLESNYTIIDTDDQLRLLKQLIT
DSDLDEKRWPARQLAGLIDRWKNRGLNPDDLDAVDNESYANGRGQAMYRLYQERLKALNA
CDFGDLMLHMLNIFRKHHDVLADYQKRFKYILVDEYQDTNAVQYLWLRLLAQEHKNICVV
GDDDQSIYSWRGAEVANILRFEKDFPGAHVVKLEQNYRSTPHILGAASGLIRANSERHEK
TLWTEANGGDKVRVIGVWDAPEEARRVGEEIERLEGEGAPLDQVAILVRAQYQTREFEDR
FIQIGVNYRIIGGFRFYERAEIRDALAYLRVIAQPQDDLAFERIYNQPKRGLGAKTLEKM
HQHARRTGLPLAAASLELADSDELPKRAANTIGGLMRQFLAWREAAEAMTPSDLLRLVLE
ETGYNDMLANDRSAESAGRAENLSELARAMEEYETLGDFLEHVALVMDNDRGDEEETVTI
MTIHAAKGLEFDHVFCVGWEEGVFPSQRAIDEGGLASLEEERRLAYVAITRARRRCIILH
AANRRIYGQWISSIPSRFIEELPEEHIEQETTLTGGASLWRANWSENEDPFAHVARDRPD
RAQARGPGWQRAIATGYEPRQQRVAEPGRSAASFAAQPRSDIAIGAMVHHDKFGTGCVID
QEGNKLTIEFEDAGEKRVIDSFVKVVG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
ctgaacccgccccagcgcgaggcggtactgacgaccgaggggccggtgctgatgctggcc
ggcgcgggcacgggcaagaccgccgcgctgacatcgcgccttgcgcacctcgtcgcgacc
cgccgtgcatggccgagccagatcctgtgtgtcaccttcaccaacaaggccgcacgcgaa
atgcgcgggcgggtcgcggagcatctggggcaggcggtcgaaggcatgccgtggctcggc
acgttccactcgatctgcgccaagatgctgcgccgccacgccgagctggtcgggctcgaa
tcgaactacacgatcatcgacaccgacgatcagcttcggcttctcaagcagctcattacg
gacagcgatctcgacgagaaacgctggcccgcgcgccagctcgccgggctgatcgaccgc
tggaagaatcgcgggctcaatcccgacgatctcgatgcggtggacaacgaaagctatgcc
aacggacgcggacaggcgatgtaccggttgtatcaggagcgcttgaaggcgctgaacgcc
tgtgatttcggcgatctgatgctgcatatgctcaacatcttccgcaaacatcacgatgtg
ctcgcggactatcagaagcgcttcaagtatatcctcgtcgacgagtaccaggataccaac
gcagtccagtatttgtggctgcgcctgctcgcgcaggagcacaagaacatctgcgtcgtg
ggggacgacgaccagtcgatctattcgtggcgcggtgccgaagttgcaaacatcctgcgg
ttcgagaaggatttccccggtgcgcatgtcgtcaagctggagcaaaactaccgctcgacc
ccgcatatcctcggcgcggcgtcgggcctgatccgggcgaacagcgaacgccacgaaaag
acactgtggaccgaagccaatggcggcgacaaggtccgcgtaatcggtgtctgggacgcg
cccgaggaagcgcgccgggtcggtgaagagatcgaacggctagaaggcgaaggcgccccg
ctcgatcaggtcgcgatcctcgtccgcgcgcaatatcagacccgcgagttcgaagaccgt
ttcatccagatcggcgtcaactaccggatcatcggcggcttccggttctacgaacgcgcc
gagatccgcgatgcgctcgcctatctgcgggtgatcgcgcagccgcaggacgatctcgcg
ttcgagcggatctacaaccagcccaagcgcgggcttggtgcgaaaacgctcgagaagatg
caccagcatgcgcggcgcaccgggttgccactggctgctgcctcactcgaactggccgac
agcgacgaattgcccaagcgcgcggcaaacacgatcggcgggctgatgcggcagttcctc
gcctggcgcgaggcagcggaagcgatgacaccgtcggacctgcttcggctggtgctcgag
gaaaccggctacaacgacatgctggcgaacgaccgctcggccgaaagcgccggccgcgcc
gagaacctctccgaactcgcgcgcgcgatggaggaatacgagacgctcggcgatttcctc
gaacatgtcgcgctggtgatggacaacgatcgcggggacgaggaggaaaccgtcacgatc
atgacgatccacgccgccaagggactcgagttcgaccacgtgttctgcgtcggatgggag
gaaggcgtgttccccagccagcgcgcgatcgacgaaggcgggcttgccagcctcgaagag
gaacgccgcctcgcctatgtcgcgatcacgcgcgcacgacgacgctgcatcatcctgcac
gccgccaaccggcgcatctacggccagtggatcagctcgatcccttcgcgcttcatcgag
gaactgcccgaggagcatatcgaacaggagacgacgctgaccggtggcgcctctctgtgg
cgcgccaactggagcgagaacgaggacccgttcgcgcatgtcgcccgcgaccgtccggat
cgtgcgcaggcgcgcggccccggttggcagcgcgcgatcgcgaccggatacgaaccgcgc
cagcagcgcgtggccgaaccgggccgctcggccgccagcttcgccgcccagccccgtagc
gacatcgccatcggcgcaatggtgcaccacgacaagttcggcaccggatgcgtgatcgat
caggaggggaacaagctcaccatcgagttcgaagatgccggcgagaaacgcgtgatcgac
agcttcgtgaaggtggtggggtga
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integrated database retrieval system
