Erythrobacter sp. JK5: KDC96_05595
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Entry
KDC96_05595 CDS
T10266
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eryt Erythrobacter sp. JK5
Pathway
eryt03410
Base excision repair
eryt03430
Mismatch repair
eryt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDC96_05595 (recJ)
03430 Mismatch repair
KDC96_05595 (recJ)
03440 Homologous recombination
KDC96_05595 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eryt03400
]
KDC96_05595 (recJ)
DNA repair and recombination proteins [BR:
eryt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KDC96_05595 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KDC96_05595 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KDC96_05595 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QUL38843
UniProt:
A0A975PRP1
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All DBs
Position
1142282..1144069
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AA seq
595 aa
AA seq
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MATQSLTYVFGVAQSLSGRAWHWRGGNMELGDGAGALDRDILSQLLMTRGVARDDVARHA
RPTLRDFLPDPSAFRDMDQAAERIAQAILAAERITIYGDYDVDGATSAALMVEVLRALGS
EADFYIPDRLLEGYGPSGEALVALAEAGSSLIVTVDCGAMAHEALTIARDAGVDVIVVDH
HKCAADLPPTAALVNPNRLDESDLAASHGHLAAVGVAFLLAIALVRTLRAQDYFTQREEP
DLMGLLDLVALGTVADVAALHGLNRAFVAQGLKVLARRERIGMAALMDASRLKRAPQASD
LGFALGPRINAGGRIGESTLGVRLLTTRDPEEARAIAEQLSALNEERRAIEAEVQEAAEA
QIAGQHNCAVHVIAGAGWHPGVIGIVAGRIKEKTGRPAIVIAQDDKEGTGKGSGRSISGV
DLGAAIIAAREEGLLVAGGGHAMAAGLTVPNDKLAAFTEFLDQRLARDVELARAGQAMKL
DLALAPGGLTPELVDTLETAGPYGVGWPAPRVAVGPVRVVKADVVGKDHLRVIASGGDGK
SFKSIAFRAAETEMAQTLLHRSAGRQFHFAGRVKIDDWGTRPAAELHLEDAAFAD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaatcgctgacctatgtcttcggggttgcgcagtccctgtcgggccgcgcc
tggcactggcgcggaggcaacatggagcttggcgacggtgccggcgcgctcgatcgcgac
atcctctcgcaattgctgatgacgcgcggcgtggcgcgggacgacgtcgcgcgccatgcc
cgcccgaccctgcgcgatttcctgcccgatccttcggcttttcgcgacatggaccaggcc
gccgagcggatcgcgcaggccatactcgctgcggaacggatcacgatttacggcgattac
gatgtcgatggcgcgaccagtgccgcgttgatggtcgaagtgctgcgcgcgctcggcagc
gaggcagatttctacattcccgatcgcctgctggaaggatacggccccagcggcgaggcg
ctggtggcgctggccgaagccggatcgagcctgatcgttaccgtcgattgcggcgcgatg
gcgcacgaagccctgaccatcgcacgcgacgccggggtcgacgtgatcgtggtcgatcac
cacaaatgcgccgccgatctcccccctacggcggcgctggtcaatcccaaccggctcgac
gaaagcgacctggccgccagccatggccatctggcggcggtcggggtcgcgttcctgctg
gcgatcgcgctcgtgaggaccctgcgcgcgcaggattatttcacgcagcgcgaggagccc
gacctgatgggcctgctcgatctggtggcgctaggcaccgtggctgatgttgccgcactt
cacgggctcaaccgcgcgttcgtggcgcagggtctcaaggtgctggcccggcgcgagcgg
atcgggatggcggcactgatggatgcaagccggttgaagcgcgcaccgcaggccagcgat
ctcggcttcgcgctcggtccgcgcatcaacgccggcggaaggatcggcgaatccacgctg
ggcgtgcggctgctgaccacgcgcgaccccgaagaggcgcgtgccatcgccgaacagctt
tccgcactcaacgaagagcgccgcgcgatcgaagcggaggtgcaggaagccgcagaagcg
caaatcgccggacagcacaattgcgccgtgcatgtcatcgccggtgcaggctggcatccc
ggtgtgatcggcatcgtcgcaggccggatcaaggagaagaccggacgacccgcgatcgtg
atcgcgcaggacgataaagagggcaccggcaagggcagcggtcgctcgatcagcggagtc
gatctcggcgcggcgatcatcgcggcgcgcgaggaagggctgttggtggcgggcggaggg
catgccatggcggcaggcctgaccgtgccgaacgacaagctcgcagcgttcaccgaattt
ctcgatcagcggctggcacgcgatgtcgaactggcgcgcgcgggccaggcgatgaagctc
gatctcgcgcttgctccaggcggcctgacgcccgaactggtcgatacgctcgagaccgca
ggcccctacggggttggctggcctgcacctcgcgtcgcggtcggccccgtccgggtggta
aaggcggacgtcgtcggcaaggatcatctgcgggtgatcgccagcggtggcgatggcaaa
tcgttcaagagcatcgccttccgcgcggccgagaccgagatggcgcagaccctgctgcat
cgcagtgcaggccggcaattccactttgccgggcgcgtgaagatcgacgattggggcacc
cgccctgccgccgaattgcatctcgaagatgccgcatttgccgattga
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