Erythrobacter sp. JK5: KDC96_05990
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Entry
KDC96_05990 CDS
T10266
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
eryt Erythrobacter sp. JK5
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eryt03400
]
KDC96_05990 (addA)
Enzymes [BR:
eryt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDC96_05990 (addA)
DNA repair and recombination proteins [BR:
eryt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KDC96_05990 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
QUL38903
LinkDB
All DBs
Position
complement(1223619..1227137)
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AA seq
1172 aa
AA seq
DB search
MSSSGSGLVFPLEGNQRRAVDPRDNVWLSASAGTGKTQVLSARVLRLLLRPDVKPSEILC
LTFTKAGAAEMANRINAVLARWVRLDDTKLFRELGDLGAEQTDAVRERARTLFASVLDCP
GGGLRIDTIHAFSQWLLANFPEEADLMPGARPMEDRERELLAREVLADMLDDADTRGDAA
VLDAVEMFTTRKEPGALRGWLMRCASQAEMWEGTGAWQPPMRPRVHTLLEMPADADDNWA
SRLLEPATFPDHQLQAMIGPLEEWGKKDGLKALAAIREWLAIGKADRSQGLPCLLGTVLN
ADGLPNGKIRFVTKHDPEFINRQQEVAEAVAIYSEHQALLDLADLLTHALELGRAFWLRW
EEAKRRDGLLDFNDLIRKAAALLNGSIASDWIRYKLDRQFDHILIDEAQDTNRAQWDIVD
ALIDDFFSGEGAAGDKLRTIFTVGDYKQAIFGFQGTSPENYERAKIKIRQRIMDARENAS
QLRANRLIPNWEELDLGRSFRTSQPVLAFVNRAIETLGHDAFGLPDPPAPHEGDERAGLV
TLWTPVTAETLDPEEDEAQERDWLPAHETVLAGKIAEQVQRWVEGEERFVLEKGGRRRHA
APGDIMVLVRKRGALAAQIVAQLHARKVPVAGVDRLRLGAPLAVQDLMAALRFAAQPLDD
LSLANLLGSPLIGWSQDDLLEYVPRGRDVRLWNHLRDHAAPFVRETCARLGQLLARADFE
TPQALLAWLLTGPWQGRRRLVSRLGREANDPIDELVNTAFAYQSAHVPSLAAFIEWFDAS
SEELKRDADDAGGQVRVMTVHGSKGLQAPIVILADATGKPGDPGDLELGETPLGEATPEQ
ERRKVPLPSVKKEERAGPVKTAAEAKAASAMQEHWRLLYVAMTRAEEALFIGGSLGKRDL
KNGPHEDSWYARLEPLFGDELADPIWGARREIGRRADPLSGEDAQTLSETGPDLPRWVTA
PIGPEPRPPRPLAPSAAGEDQGADPPLAPELVQQAARRGVLVHRLLERLPDVPRETRAEV
ARTWLDRQGGAFDADARAEMLASALAVLDHPGFAVIFSPDALAEVPLAATVDGMVVAGTV
DRLLVTSDAVTVVDFKTSRRPPRRQEDIPPAALRQMAAYVAALGVIYPGRAIRAAILYTQ
TPCLFEISPDRLAPHKQRLGETQESYAPLDIE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctccggttcgggcctcgtctttccgctggagggaaaccagcgccgcgcagtc
gatccgcgcgacaatgtctggctttcggcctccgcgggaacgggcaagacgcaggtgctg
tccgcgcgggtgctgcggcttttgctgaggcccgacgtcaaaccgtccgaaatcctgtgt
ctgacctttaccaaggctggcgcggcggagatggccaatcgcatcaacgcggtgctggcg
cgctgggtgcggctggacgacaccaagctgttcagggaactcggcgatctgggggcggag
cagaccgacgcggtgcgcgagcgcgcccgaacgctgttcgcaagcgtgctcgattgcccc
ggcggcggcctcagaatcgatacgatccatgccttctcgcaatggctgctcgccaatttc
cccgaggaagccgatctgatgccgggagcgcggccgatggaggatcgcgagcgcgaattg
ctggcgcgcgaagtcctcgccgacatgctcgacgacgccgacacgcgcggcgatgcggcg
gtgctcgatgcggtcgagatgttcaccacgcgcaaggaaccgggcgcgctgcgcggctgg
ctgatgcgctgcgccagccaggccgagatgtgggaagggaccggcgcgtggcagcccccg
atgcgaccgcgggtgcatactttgcttgaaatgccggccgatgccgatgacaattgggcg
agccgattgctcgaacctgcgacgttccccgaccatcaacttcaggcgatgatcggcccg
cttgaagaatggggaaagaaagatggattgaaggccctggctgctattcgggaatggcta
gccattggaaaggccgaccgttctcagggccttccatgcctcctcggaaccgtcctcaat
gcagatgggcttcccaacggaaaaatcagatttgttaccaagcacgatcctgagttcata
aatcggcagcaggaagttgccgaagcggtagcgatctattctgagcaccaagccctgctc
gacctcgccgatctcctcactcacgcgctcgagctcgggcgggcgttctggctgcgctgg
gaggaggcgaagcggcgcgacgggctgctcgacttcaacgacctgatccgcaaggcggcc
gccttgctcaacggcagcatcgcgtccgactggattcgctacaagctcgatcggcaattc
gatcacatcctgatcgacgaagcgcaggataccaatcgcgcgcaatgggacatcgtcgat
gcgctgatcgacgatttcttcagcggcgagggcgcggcgggggacaagctgcgcaccatc
ttcacggtcggcgattacaagcaggcgattttcggattccaggggaccagtccggagaat
tacgagcgcgccaagatcaagatccgccaacggatcatggatgcgcgcgagaacgcgtcg
cagctgcgcgccaatcggctgatccccaattgggaggagctcgatctcgggcggtcgttc
cggacgtcgcagccggtgctggccttcgtcaaccgcgcgatcgaaacgctcgggcacgat
gccttcggcctgcccgatccacccgctccgcacgaaggcgacgagcgcgccggactggtc
acgttgtggacgccggtgaccgcagaaacgctcgatccggaggaagacgaagcgcaggaa
cgcgactggctgcccgcccacgagaccgtgctggctggcaagatcgccgagcaggtgcag
cgctgggtcgaaggcgaagagcgcttcgtgctcgaaaagggcggcaggcgccgccatgcc
gcaccgggcgatatcatggtgctggtgcgcaagcgcggtgcgctcgcggcgcagatcgtc
gcgcagctccacgcgcgcaaggtgccggtggccggggtcgaccggctgcgcctcggcgcg
ccgctggcggtgcaggacctgatggcggcgttgaggttcgccgcgcagccgctcgacgac
ctgtcgctcgccaatttgctcggatcgccgctgatcggctggagccaggacgacctgctg
gaatacgtcccgcgcggtcgcgacgtgcggctgtggaatcacctccgcgatcacgccgcg
cccttcgtccgggaaacgtgcgcgcggctcgggcaattgctggcccgggccgacttcgag
accccgcaggcgctgctggcgtggttgctcaccggcccgtggcaggggcggcgcaggctg
gtttcacggctgggtcgcgaggcgaacgatccgatcgacgagctggtcaacaccgcattc
gcctatcagagcgcgcacgttcccagccttgctgcgttcatcgaatggttcgacgcttcg
agcgaggaattgaagcgcgatgcagacgatgccggcgggcaggtgcgggttatgaccgtg
cacgggtcgaagggattgcaggcgccgatcgtgatcctcgccgatgcgaccggaaagccg
ggcgatcccggcgatctcgagcttggggagaccccgctgggcgaggccactcccgagcaa
gagcgccgcaaggtcccgctgccttcggtcaagaaggaagaacgcgcgggtccggtaaag
acggcagcggaagcgaaggcggcgagcgcgatgcaggagcactggcggctgctctatgtg
gcgatgacgcgggccgaagaggcgctgttcatcggcggatcgctgggcaagcgcgacctc
aagaacggcccccacgaagacagctggtatgcccggctcgaacccttgttcggagatgag
ctcgcggacccgatctggggcgcgcggcgcgaaatcggcaggcgtgccgatccgctgtcc
ggtgaggatgcccagacattgtcggaaaccggcccggatcttccgcgctgggtcacagcc
ccgatcggccccgaaccgcgcccgccgcgaccgctggcgccgagcgccgcaggcgaggat
cagggcgccgatccgccgctcgcacccgagcttgtgcaacaggccgctcggcgcggcgtg
ctggtccaccgcctgctcgaacgcctccccgacgtgccgcgcgaaacccgggccgaggtg
gcgcggacgtggctcgatcggcagggcggtgcgttcgatgccgatgcacgtgccgagatg
ctcgcaagcgcgcttgcggtgctcgatcatcctggctttgcggtgattttctcgcccgac
gcgctggccgaggtcccgctcgccgcgacggtcgacgggatggtcgttgccggtaccgtc
gaccggctgctggtgacctccgatgcggtgacggtggtcgatttcaagaccagtcgccgc
ccgccccgccgacaagaagatatccctcccgctgcactgcgccagatggcggcctatgtg
gcggcgctcggggtgatctatcccggccgcgccattcgcgcggcgatcctgtatacgcag
acgccgtgcctgttcgaaatttcgcccgaccggctcgcaccgcacaagcagcgattgggc
gagacgcaggaatcctatgcgccgctcgatattgagtga
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