Erythrobacter sp. JK5: KDC96_06245
Help
Entry
KDC96_06245 CDS
T10266
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eryt Erythrobacter sp. JK5
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eryt03032
]
KDC96_06245 (topA)
03400 DNA repair and recombination proteins [BR:
eryt03400
]
KDC96_06245 (topA)
Enzymes [BR:
eryt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KDC96_06245 (topA)
DNA replication proteins [BR:
eryt03032
]
Prokaryotic type
DNA Topoisomerases
KDC96_06245 (topA)
DNA repair and recombination proteins [BR:
eryt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KDC96_06245 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QUL38947
LinkDB
All DBs
Position
complement(1275393..1277927)
Genome browser
AA seq
844 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGADFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQK
RFKEIADAAKDASRLVLATDPDREGEAISWHVQELLKKRKALPTKVDRVTFNAITKAAVT
EAMKSPRELDQPLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIEAFRADEYWSVIARLEQDGTEFDARLVRFKGEKLEKLSLGHEGIALEAKAAVEAGRF
TIEAIETKPLKRNPAPPFTTSTLQQEAARKLGYSASHTMRLAQSLYEAGAITYMRTDGVQ
MDMSAIMAARDAIAERFSAEYRPEKPRFYSTKAKNAQEAHEAIRPTNFSRDRAGSGDEGK
LYDLIFKRAMASQMAAAQLERTTITLRDATGQHELRATGQVIKFPGFFAVYQEGIDDSED
DEDGLLPAMKRGDAPAKKAVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRDYVRMEKNRFFAEESGRLLTAFLERFFPTYVAYDFTAGMEEELDTVSDGREDYKELL
ANFWKDFKPKTEEVMEKLPSEVTEVLDDYLSDYLFPPREDGKDARFCPLCDQEGREGGRL
SLRGGRFGAFVACQNYPECKYTRRFAQPGADGSDPAEDGVMGEHPETGAEIHRKSGRFGP
YVEMEIDDKKVRASIPKDLDDFDLEWAVKLLDLPRIIGAHPETGKEIEAAIGRYGPYLRH
DGKYAKLSSTRDVFDTGMNAAVTLLAEAANRKGGSRGKAEPIKTLGEHPTSGGEIKVMPG
RYGPYVTDGTTNATIPKDIKPEDIEAAKAIELIDARAAKGPAKKKRKKAAPKKKAAPKKK
SAAK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtgatcgttgaatcgcccgccaaggcgaagaccatcgagaaatatctgggc
gcggacttcaaggttctcgccagctacggccacgtccgcgatctgccgcccaaggacggc
agcgtgcgcccggacgaggatttcgcgatggattgggaactctatcgcgacaagcagaag
cgcttcaaggaaatcgccgacgcggccaaggacgcctcgcggctggtgctcgcgaccgac
cccgaccgcgagggcgaggcgatcagctggcatgtccaggagctgctgaagaagcgcaag
gcgttgccgaccaaggtcgaccgggtcaccttcaacgcgatcaccaaggctgcggtgacc
gaagcgatgaaaagcccgcgcgaactcgatcagccgctgatcgacgcctatctcgcgcgg
cgtgcgctcgattacctgttcggtttcaccctgtcccccgtgttgtggcgcaagctcccc
ggggcgaagtctgcgggccgagtgcaatcggtggcgctgcgcctgatcgttgaacgcgag
cgcgaaatcgaggcgtttcgggcggacgaatactggtcggtaatcgccaggctcgaacag
gacggaaccgagttcgacgcgcggctggtcaggttcaagggcgagaagctggaaaagctt
tcgctcggccacgaaggaatcgcgctggaagccaaggcggcggtcgaggccgggcgcttc
accatcgaggcgatcgagaccaaaccgctcaaacgcaaccccgcgccgccgttcaccaca
tcgaccctgcaacaggaggctgcgcgcaagctcggctattccgccagccacacgatgcgg
ctcgcacagtcgctctacgaggcgggcgcgatcacctacatgcggaccgacggggtgcag
atggacatgtcggcgatcatggccgcgcgcgatgccatcgccgagcgattcagcgcggaa
taccggcccgagaagccgcggttctacagcaccaaggcgaagaacgcgcaggaagcgcac
gaagcaatccgtccgaccaatttcagccgcgaccgcgccggatcgggcgacgagggcaag
ctttacgacctgattttcaagcgcgcgatggcgagccagatggccgccgcgcagctggag
cgcaccaccatcaccctgcgcgacgccaccggccagcacgagctgcgcgcgaccggtcag
gtcatcaagttccccggcttcttcgcagtctaccaggaagggatcgacgacagcgaagac
gatgaggatggcctgctgcccgcgatgaagcggggcgatgcgcccgcgaaaaaggcggtc
gaggccaaccagcacttcacccagccgccgccgcgcttctccgaggcctcgctggtcaag
cggctcgaggagctcggcatcgggcgtccatcgacctatgcctcgaccatccagacgctg
cgcgatcgcgactatgtgcggatggagaagaaccgcttcttcgccgaggaatcgggccgg
ctgctgaccgcgtttctcgaacggttcttcccgacctatgtcgcctacgatttcaccgcc
ggtatggaggaggaactcgataccgtttcggatgggcgcgaggactacaaggagctgctc
gccaacttctggaaggacttcaagccgaagaccgaagaggtgatggagaagctgccctcg
gaagtgaccgaggtgctcgacgattacctgtccgactacctgttcccgccgcgcgaggac
ggcaaggatgcgcgcttctgcccgctatgcgaccaggaagggcgcgagggcggcaggctg
tcgttgcgcggcggccggttcggcgcattcgtggcgtgccagaactatcccgaatgcaaa
tacacccgccgctttgcgcagccgggggcggacggatcggaccccgccgaagacggcgtg
atgggcgagcatcccgaaaccggcgcggagatccatcgcaagtcggggcggttcggcccc
tatgtcgaaatggaaatcgacgacaagaaagtgcgcgcgtcgatccccaaagacctcgac
gatttcgacctcgaatgggcggtgaaattgctcgacctgccgcgcatcatcggcgcgcat
ccggagacgggcaaggagatcgaggcggcgatcgggcgctatggcccgtacctgcgccac
gatggcaaatacgccaagctatcgagcacgcgcgacgtgttcgataccggcatgaacgcg
gcggtgacgctgctcgcggaggccgcaaaccgcaagggcggctctcgcggcaaggccgag
ccgatcaagacgctgggcgaacaccccaccagtggcggcgagatcaaggtgatgccgggc
cgctatggcccctatgttaccgatggcaccaccaacgcgacaattcccaaggatatcaag
cctgaggatatcgaagcggccaaagcgatcgaactgatcgatgcccgcgcggccaagggg
ccggcgaagaagaagcgcaagaaggctgcgccgaagaagaaagctgcgcccaagaaaaag
agcgctgcgaagtga
DBGET
integrated database retrieval system
