Erythrobacter sp. JK5: KDC96_08560
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Entry
KDC96_08560 CDS
T10266
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
eryt Erythrobacter sp. JK5
Pathway
eryt00300
Lysine biosynthesis
eryt00470
D-Amino acid metabolism
eryt01100
Metabolic pathways
eryt01110
Biosynthesis of secondary metabolites
eryt01120
Microbial metabolism in diverse environments
eryt01230
Biosynthesis of amino acids
Module
eryt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eryt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDC96_08560 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDC96_08560 (lysA)
Enzymes [BR:
eryt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KDC96_08560 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QUL36499
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Position
1739645..1740904
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AA seq
419 aa
AA seq
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MDHFALKDGVLHAEDVPLPRIADEVGTPVYVYSRATLERHAQVFRDGLSDVPDKLIAFAV
KSNPNLAVLKVLQRQGYGADVVSVGEMRRALAAGIAPELIVFSGVGKTRAELTAALEAGI
GQFNIESEEEGLELAELAAAMGLTAHCALRINPDVDAGTHDKISTGKADNKFGVPIDQAG
QIFGKLASHDGVNLRGVAVHIGSQLGELAPLERAFAKLGELVAALRGAGHAITHVDLGGG
LGVPYRKGEQLPSPAEYGAMVARVTRDWGVKLIFEPGRVIAGNAGVLLTRVVRVKRGLNH
PFVIVDAAMNDLARPALYGAYHHFEAVEPTGADMTANIVGPICETGDTFAMGRECDALQS
GDLAVFRTAGAYGATMASSYNSRGFVAEVLVDGDKFAVVADRIAAGAIMDAERVPEWLA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttgccctgaaggacggcgtgctgcacgccgaggacgtgccgctgccgcgc
attgcagatgaggtcgggacgccggtctatgtctattcgcgcgccacgctggagcggcat
gcacaggtgtttcgcgacgggctgtcggatgtgcccgacaagctgatcgccttcgcggtc
aagtccaaccccaaccttgcggtgctcaaggtgctgcagcggcagggatacggcgcggat
gtcgtgtcggtcggcgagatgcgccgcgcgcttgcggccgggatcgcgcccgaactgatc
gtgttctcgggcgtcggcaagacccgcgccgagctgactgccgcgctcgaagcggggatc
gggcagttcaacatcgagagcgaggaagagggcctcgagctggccgaactcgccgccgca
atggggctgaccgcgcattgcgcgctgcggatcaacccggatgtcgatgccgggacgcac
gacaagatctcgaccggcaaggccgacaacaagttcggcgtgccgatcgatcaggcgggg
cagatcttcggcaagctcgcgagccatgacggcgtcaacctgcgcggggtcgcggtgcat
atcggcagccagctcggcgaactggcaccgctcgaacgcgccttcgccaagctgggcgaa
ctggtcgcggcgctgcgcggcgcgggccatgcaatcacccatgtcgatctcggcggcggg
ctgggagtgccgtatcgcaagggcgaacagctgccctccccggccgaatacggcgcaatg
gtcgcgcgggtgacgcgggactggggcgtgaagctgatcttcgagccgggccgggtgatc
gcgggcaatgccggagtgctgctgacgcgcgtggtgcgggtcaagcgcgggctgaaccac
ccgttcgtgatcgtcgatgcggcgatgaacgatctcgcccgcccggctctctacggagcc
taccatcatttcgaagcggtcgaaccgaccggcgcggacatgaccgcgaacattgtcggc
ccgatctgcgaaaccggcgacaccttcgcgatgggccgcgaatgcgacgcgctgcaaagc
ggcgatctcgcggtgttccgcaccgccggtgcctatggcgcgacgatggcgtcgagctac
aattcgcgcggcttcgtggccgaggtgctggtcgatggcgacaagttcgccgtcgtggcc
gaccggatcgcggcgggcgcgatcatggatgccgagcgcgtgcccgaatggctggcctga
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