Erythrobacter sp. 3-20A1M: F7D01_05550
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Entry
F7D01_05550 CDS
T10298
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
eryz Erythrobacter sp. 3-20A1M
Brite
KEGG Orthology (KO) [BR:
eryz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eryz03032
]
F7D01_05550 (gyrB)
03400 DNA repair and recombination proteins [BR:
eryz03400
]
F7D01_05550 (gyrB)
Enzymes [BR:
eryz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F7D01_05550 (gyrB)
DNA replication proteins [BR:
eryz03032
]
Prokaryotic type
DNA Topoisomerases
F7D01_05550 (gyrB)
DNA repair and recombination proteins [BR:
eryz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F7D01_05550 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QWC56630
LinkDB
All DBs
Position
1129326..1131845
Genome browser
AA seq
839 aa
AA seq
DB search
MDENTGNTPKKNGYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEA
LAGHCDLVLIELNPDGSVSVEDNGRGIPVDMHKEEGVSAAEVIMTQLHAGGKFENTSDDN
AYKVSGGLHGVGVSVVNALSEWLELKVWRDGKEHWMRFEHGDAVKSLEVTGDAPPVESNG
DEDGLKKGTRVTFLPSTDTFKNVTEFDFDKLEHRYRELAFLNSGVRIKLRDRRGEETAEH
DLFYEGGIAAFVKYLDRNKEALIAEPISVSAEKDGIGIDVALEWNDSYYENVLTFTNNIP
QRDGGTHLAAFRAALTRTLNNYASASGLMKKEKVSLSGEDMREGLTAIVSVKLPDPKFGS
QTKDKLVSSEVRQPLESLMGEKMTEWLEENPADAKAIIQKIIDAAAAREAARRAREMSRK
GAMSIASLPGKLADCQERDATKAELFLVEGDSAGGSAKQGRDRKTQAILPLKGKILNVER
ARFDRIISSKEVGTLIQAMGTGLRDEFNLDKLRYHKIVIMTDADVDGAHIRTLLLTFFHR
QLPEIVKAGHLFIAQPPLYKVSKGRSEVYLKDDRELDRYLTSTGLDGRVLQTAGGARADA
DLAALVDHAMRVRSLIGFAPRRYDPVIIEALAMGGAFDPADPGSAAALDAAAARLQMGDS
EAEWSGRRGEDGNVRLERVWRGVTDVHLVDAKFLESAEARKLHSVLALEAETYAAPALLV
KGGTQEPVSPEGEGDDETDSDSPALTDDNAITRPTQLLDAVLAAGRKGLSVQRYKGLGEM
NAEQLWETTLDPENRSLLQVKVEDADVTDEIFTRLMGDVVEPRREFIQVNALNVANLDI
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacaccggaaacacccccaaaaagaatggctatggcgcggactcgatcaag
gtcctgaaaggcctcgacgcggtccgcaaacggcccggcatgtatatcggcgataccgac
gacgggtcgggcctgcaccacatggtgttcgaggtgtcggacaacgccatcgacgaagcg
ctggccgggcattgcgacctcgtactgatcgaactcaaccccgacggctcggtttcggtc
gaggacaatggccgcggcattccggtggacatgcacaaggaagaaggcgtgtcggcggca
gaggtcatcatgacccagctgcacgcgggcgggaagttcgagaacacgagcgacgacaat
gcctacaaggtgtcgggcggcctccacggcgttggcgtctcggtcgtcaacgcgctcagc
gaatggctcgaactcaaggtctggcgcgacggcaaggagcactggatgcgcttcgagcat
ggcgacgccgtgaagtcgctcgaagttacgggcgatgccccgccggtcgagagcaatggc
gacgaggacggtttgaagaagggtacgcgcgtcaccttcctgcccagcaccgacacgttc
aagaacgtcaccgaattcgatttcgacaagctcgagcaccgctatcgcgaactcgccttc
ctcaattccggcgtgcgcatcaaactgcgcgaccggcggggcgaggaaaccgcggagcat
gacctgttctacgaaggcgggatcgcggccttcgtcaaatatctcgaccgcaacaaggaa
gcgctgatcgccgagccgatctcggtgagcgcggagaaggacggcatcgggatcgacgtc
gcgttggaatggaacgactcgtattacgagaacgtcctcaccttcaccaacaacatcccg
cagcgcgacggcggcacgcacctcgccgccttccgcgccgcgctgacccgcactctcaac
aactacgcatcggccagcgggctcatgaagaaggagaaggtcagcctctcgggcgaggac
atgcgcgaaggtcttaccgcgatcgtctcggtcaagctgcccgatcccaagttcggatcg
cagaccaaggataagctggtctcctccgaggtccgccagccgctggaatcgctgatgggc
gagaagatgaccgagtggctggaggaaaaccccgccgacgcgaaggcgatcatccagaag
atcatcgacgccgccgccgcgcgcgaggccgcgcgacgcgcacgcgaaatgagccgcaag
ggcgcgatgagcatcgcctcgctccccggcaagcttgccgattgtcaggaacgcgacgcg
acgaaggcagagctgttcctggtcgagggtgattcggcgggcggctccgccaagcagggc
cgcgatcgcaagacgcaggcgatcttgccgctcaagggcaagattctgaacgtcgagcgc
gcgcgcttcgaccggatcatttcgtcgaaggaagtcggcacgctgatccaggcgatgggc
accggcctgcgcgacgaattcaacctcgacaagctgcgctatcacaagatcgtgatcatg
accgacgccgacgtcgacggcgcgcatatccgcacgctactgctcactttcttccaccgc
cagctgcccgagatcgtgaaggcgggccacctcttcatcgcccaaccgccgctctacaag
gtgagcaagggccggtccgaggtgtacctgaaggacgatcgcgagctcgaccgctacctc
accagcaccgggctcgacggacgcgtcctgcaaaccgcaggcggcgcgcgggcggatgcc
gatctcgccgcgctggtcgaccacgcgatgcgcgtgcgcagtctgatcggcttcgcgccg
cgccgctacgaccccgtcatcatcgaagcgctggccatgggcggtgcgttcgatccggcc
gatccgggttcggcagccgcgctggatgccgccgcggcacggttgcagatgggcgatagc
gaggccgagtggtcgggccgccggggcgaagacggcaacgtccggctcgaacgggtgtgg
cgcggcgtgaccgacgtccacctggtcgatgccaagttcctcgaaagcgcggaggcgagg
aagctccattccgtgctggcgctggaggcggaaacctacgccgcgcccgccttgctggtg
aagggtggtacgcaggagccggtctcgcccgaaggggaaggcgacgacgaaaccgattcc
gattcgcccgcgctgacggacgacaacgcgatcacgcgcccgacgcaattgctcgacgcg
gtgctggcagcggggcgcaagggcctgtcggtccagcgttacaaggggctgggcgagatg
aacgcggaacagttgtgggagaccacgctcgaccccgaaaaccgctcgctgctgcaggta
aaggtcgaagatgccgacgtgaccgacgagatcttcacccgcctgatgggcgacgtggtc
gagccgcgccgcgagttcatccaggtcaacgccctgaacgtcgcgaacctcgatatctga
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