Erythrobacter sp. 3-20A1M: F7D01_08885
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Entry
F7D01_08885 CDS
T10298
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
eryz Erythrobacter sp. 3-20A1M
Pathway
eryz02020
Two-component system
eryz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eryz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F7D01_08885 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F7D01_08885 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eryz03021
]
F7D01_08885 (rpoN)
Transcription machinery [BR:
eryz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F7D01_08885 (rpoN)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
QWC57184
LinkDB
All DBs
Position
complement(1808349..1809809)
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AA seq
486 aa
AA seq
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MALAPRLDLRQSQSLVMTPQLQQAIKLLALSNLEIETFIGEALEANPLLEAGEVRREDGG
DELGEAQAPSEYEADSAGGDEALDIDPGALDRDRDTGDGDWGTALSAPGGAADDLPGIEE
RHASGETLAEHLDAQVGAVAGDVREEFLARHIIGLLDEAGYLRSDLAEVARDLGVPLAEA
ERALEVVQALEPTGVGARNLGECLALQAKEADRYDPCMARLIDNLELVARGEVSRLKRMC
DVDDEDFADMLAELRAYDPRPGLAFGAAEAGAVVPDILLTRDRAGSWKIALNPASLPRVV
VNREYVVELREDCRDKASRGWLREKLADARWLVKALDQRQRTILAVAAQIVEQQAGFFAK
GVSQLKPLTLRRVAEEIEMHESTVSRVTSNKYLHCERGTFELKYFFTSGVGSADGDGASA
ESVKARIRALTDAEDPKKILSDDKLVDLLKAEGFDIARRTVAKYREAAGIGSSVERRRAK
KLRAAG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgcgccccgcctcgacctgcgccagtcgcaatcgctggtgatgacgccgcag
ctgcagcaggcgatcaagctgctggcgctctccaatctcgagatcgagaccttcatcggc
gaggcgctggaggccaatccgctgctggaagcgggcgaggtccggcgcgaggatggcggg
gacgagctcggcgaagcgcaggccccgtccgaatacgaggccgacagcgcaggtggcgac
gaagcgctcgacatcgatcccggcgcgctcgaccgcgatcgggacaccggcgacggcgac
tggggcacggcgctgtccgctcccgggggtgccgcggacgacctgccggggatcgaggaa
agacacgccagcggcgaaacgctggccgaacatctcgatgcgcaagtcggcgcggtggcg
ggcgatgtgcgcgaggaattcctcgcgcgccacatcatcggcctgctcgacgaggcgggc
tatctgcgcagcgatctggccgaggtcgcgcgcgatctgggcgtgccgctggccgaggcg
gaacgcgcgctcgaagtggtgcaggcgctggagccgaccggggtcggcgcgcgcaatctg
ggcgaatgcctcgccctgcaggcgaaggaggcggaccgctacgatccgtgtatggcgcgg
ctgatcgacaatctcgagctcgtcgcgcgcggcgaggtttcgcggctcaagcgcatgtgc
gacgtcgacgacgaggatttcgccgacatgctggcggagctgcgcgcctacgatccgcgg
cccggcctcgccttcggcgcggcggaggcgggcgcggtggtgcccgacatcctcctgacc
cgggatcgcgcgggaagctggaagatcgcgctcaatcccgccagcctcccgcgcgtcgtg
gtgaaccgcgaatatgtggtcgagctgcgcgaggactgccgcgacaaggcgagccgcggc
tggttgcgcgaaaagctggccgatgcgcgctggctggtgaaggcgctcgaccagcgccag
cggaccatcctggcggtggcggcgcagatcgtagaacagcaggccggtttcttcgccaag
ggggtcagccagctgaagccgctgaccctgcgccgggtggcggaagagatcgagatgcac
gaaagcaccgtcagccgcgtcacaagcaacaagtacctgcactgcgagcgcgggacgttc
gagctcaaatatttcttcaccagcggcgtcggcagcgccgatggcgacggggcgagcgcg
gaatcggtaaaggcccgcatccgcgcgctgaccgatgccgaggatccgaagaaaatcctg
tccgacgacaagctggtcgacctgctgaaagcggaagggttcgacatcgcccgccgcacg
gtcgcgaaatatcgcgaggccgcgggcatcggatccagcgtggaacgccgacgcgcgaaa
aagctgcgcgcggccggataa
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