KEGG   Erythrobacter sp. 3-20A1M: F7D01_08885
Entry
F7D01_08885       CDS       T10298                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
eryz  Erythrobacter sp. 3-20A1M
Pathway
eryz02020  Two-component system
eryz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:eryz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F7D01_08885 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    F7D01_08885 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eryz03021]
    F7D01_08885 (rpoN)
Transcription machinery [BR:eryz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     F7D01_08885 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Sigma70_r4 Arg_repressor
Other DBs
NCBI-ProteinID: QWC57184
LinkDB
Position
complement(1808349..1809809)
AA seq 486 aa
MALAPRLDLRQSQSLVMTPQLQQAIKLLALSNLEIETFIGEALEANPLLEAGEVRREDGG
DELGEAQAPSEYEADSAGGDEALDIDPGALDRDRDTGDGDWGTALSAPGGAADDLPGIEE
RHASGETLAEHLDAQVGAVAGDVREEFLARHIIGLLDEAGYLRSDLAEVARDLGVPLAEA
ERALEVVQALEPTGVGARNLGECLALQAKEADRYDPCMARLIDNLELVARGEVSRLKRMC
DVDDEDFADMLAELRAYDPRPGLAFGAAEAGAVVPDILLTRDRAGSWKIALNPASLPRVV
VNREYVVELREDCRDKASRGWLREKLADARWLVKALDQRQRTILAVAAQIVEQQAGFFAK
GVSQLKPLTLRRVAEEIEMHESTVSRVTSNKYLHCERGTFELKYFFTSGVGSADGDGASA
ESVKARIRALTDAEDPKKILSDDKLVDLLKAEGFDIARRTVAKYREAAGIGSSVERRRAK
KLRAAG
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggcactcgcgccccgcctcgacctgcgccagtcgcaatcgctggtgatgacgccgcag
ctgcagcaggcgatcaagctgctggcgctctccaatctcgagatcgagaccttcatcggc
gaggcgctggaggccaatccgctgctggaagcgggcgaggtccggcgcgaggatggcggg
gacgagctcggcgaagcgcaggccccgtccgaatacgaggccgacagcgcaggtggcgac
gaagcgctcgacatcgatcccggcgcgctcgaccgcgatcgggacaccggcgacggcgac
tggggcacggcgctgtccgctcccgggggtgccgcggacgacctgccggggatcgaggaa
agacacgccagcggcgaaacgctggccgaacatctcgatgcgcaagtcggcgcggtggcg
ggcgatgtgcgcgaggaattcctcgcgcgccacatcatcggcctgctcgacgaggcgggc
tatctgcgcagcgatctggccgaggtcgcgcgcgatctgggcgtgccgctggccgaggcg
gaacgcgcgctcgaagtggtgcaggcgctggagccgaccggggtcggcgcgcgcaatctg
ggcgaatgcctcgccctgcaggcgaaggaggcggaccgctacgatccgtgtatggcgcgg
ctgatcgacaatctcgagctcgtcgcgcgcggcgaggtttcgcggctcaagcgcatgtgc
gacgtcgacgacgaggatttcgccgacatgctggcggagctgcgcgcctacgatccgcgg
cccggcctcgccttcggcgcggcggaggcgggcgcggtggtgcccgacatcctcctgacc
cgggatcgcgcgggaagctggaagatcgcgctcaatcccgccagcctcccgcgcgtcgtg
gtgaaccgcgaatatgtggtcgagctgcgcgaggactgccgcgacaaggcgagccgcggc
tggttgcgcgaaaagctggccgatgcgcgctggctggtgaaggcgctcgaccagcgccag
cggaccatcctggcggtggcggcgcagatcgtagaacagcaggccggtttcttcgccaag
ggggtcagccagctgaagccgctgaccctgcgccgggtggcggaagagatcgagatgcac
gaaagcaccgtcagccgcgtcacaagcaacaagtacctgcactgcgagcgcgggacgttc
gagctcaaatatttcttcaccagcggcgtcggcagcgccgatggcgacggggcgagcgcg
gaatcggtaaaggcccgcatccgcgcgctgaccgatgccgaggatccgaagaaaatcctg
tccgacgacaagctggtcgacctgctgaaagcggaagggttcgacatcgcccgccgcacg
gtcgcgaaatatcgcgaggccgcgggcatcggatccagcgtggaacgccgacgcgcgaaa
aagctgcgcgcggccggataa

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